Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq22 105 5e-18
>seq22
Length=171845
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 42879 GTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATC 42938
|| ||| ||||| || | | |||||||| | ||| ||| ||||| | |||||| ||
Sbjct 88118 GTAGCCACCACGAAGACGGAGAACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTC 88177
Query 42939 GGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGC 42998
|||| ||| || | || ||||| || || ||||||||||||||||| |||||||| |
Sbjct 88178 AGACAGTGTGCGGCCATCTTCCAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGG 88237
Query 42999 CGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCT 43057
|| | || || || || ||| ||| ||||||| | ||| || || |||||
Sbjct 88238 TGGGATGCCCTCCTTATC-CTGAATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCT 88296
Query 43058 CGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
| || || | || || || || || || || ||||| ||||| || |||||
Sbjct 88297 CTACCTCCAAAGTGATCGTCTTGCCAGTCAGCGTTTTGACAAATATCTGCAT 88348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381342744191124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |