Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq22 82.4 6e-11 >seq22 Length=171845 Score = 82.4 bits (90), Expect = 6e-11 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 15254 GGAATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTC 15312 ||||||||||| ||||| ||| |||||| || ||| |||| || || || | || Sbjct 88914 GGAATTCCTTCCTTGTCTTGAATCTTTGCT-TTAACATTTTCGATAGTGTCAGAAGCCTC 88972 Query 15313 TACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || ||||| || |||||||| |||||||| |||||||| ||||||||| Sbjct 88973 AACTTCCAAGGTGATCGTTTTACCAGTCAGAGTCTTTACAAATATTTGCATA 89024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362153695567098