Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq119 98.7 3e-15
seq222 89.7 1e-12
>seq119
Length=100056
Score = 98.7 bits (108), Expect = 3e-15
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 111316 TTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGT 111375
|||| || || |||||||| || | | ||||||||| |||| || ||||| ||||||
Sbjct 84150 TTCCTCTGCTAACAACAAAACGCATTTTTTGGAAGGGTGTTGTTGAGGAACTGTTGTGGT 84209
Query 111376 TTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATG 111435
||||||| ||| ||||||||||||| | | | | ||| ||| ||||| ||| |||
Sbjct 84210 TTATTCGAGGAGATACAAATGCAAATAATTTATCTGAGAAAGGTGTTAAAATCTGGAATG 84269
Query 111436 GAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATC 111495
|||||| || | | ||||| || | ||||| || | | | |||||| |||
Sbjct 84270 CAAATGGTTCTAGACAATTTCTCGACAAACTTGGTTTTACCAATCGAGCAGAAGGAGATT 84329
Query 111496 TCGGACCAGTTTACGGATTTCA 111517
| || || || || || |||||
Sbjct 84330 TAGGGCCTGTATATGGGTTTCA 84351
>seq222
Length=74321
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 22858 AATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAA 22917
||||| || || | ||||||| ||| ||| | |||||||| |||||||| || ||||||
Sbjct 45082 AATCCTTTCGATTTTATGGAACGTATATCAGTGGAAGGAAAAACCAATTTTTTTGAAAAA 45023
Query 22918 AGAGTTGGTGAATACCAAAAAGCAGGTGT 22946
| || ||||||||||||||||||||||
Sbjct 45022 CGTGTCAGTGAATACCAAAAAGCAGGTGT 44994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303257111918396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |