Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq22 87.8 2e-12
seq546 82.4 7e-11
>seq22
Length=171845
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| ||||| | ||||| || |||| || | || || |||||
Sbjct 88348 ATGCAGATATTTGTCAAAACGCTGACTGGCAAGACGATCACTTTGGAGGTAGAGGCTTCT 88289
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| || || || | |||||| |||||| || || || ||||| || || ||||||
Sbjct 88288 GATACGATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAGGGCATCCCACCAGATCAA 88229
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-AC-GTCAGCGATTATA 24168
|| || |||||| | ||| ||||| | ||||||| | | | || ||| | | || |
Sbjct 88228 CAACGATTGATTTTTGCCGGAAAGCAGTTGGAAGATGGCCGCACACTGTCTG--ACTACA 88171
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199
| ||||||||||| || ||| ||||||| ||
Sbjct 88170 ATATTCAAAAAGAGTCCACACTTCATTTGGT 88140
>seq546
Length=41299
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043
|||||||||||| | ||||| ||||| ||||| || ||| | || || | ||||| ||
Sbjct 26597 AAACAAAATGCAGATATTTGTTAAAACTTTAACCGGCAAAACAATCACTCTTGAAGTAGA 26538
Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103
|| || || ||||| | || ||| || ||| |||||||||||||| || ||
Sbjct 26537 AGCATCTGATACTATCGAAAATGTAAAATCTAAAATTCAGGACAAAGAAGGCATTCCGCC 26478
Query 24104 CGATCAACAGAGACTGATTT 24123
||||| || ||||| ||||
Sbjct 26477 TGATCAGCAAAGACTCATTT 26458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429905724175590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |