Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq59 95.1 1e-14
seq22 93.3 4e-14
>seq59
Length=128137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 106/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532
|||| | | | || || |||||||| |||||||| || ||||| ||||| ||||||
Sbjct 71870 TACCAGCAAATATAAGGCGCTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATTTTAG 71929
Query 138533 GTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
|| | | ||| | ||||| | ||| |||||||| | || | |||||||||||||
Sbjct 71930 CCTTAACATTTTCAATTGTGTCTGACGATTCCACCTCAAGTGTAATTGTTTTACCAGTCA 71989
Query 138593 GAGTTTTTACAAAAATCTGCAT 138614
|||||| |||||||| |||||
Sbjct 71990 AAGTTTTAACAAAAATTTGCAT 72011
>seq22
Length=171845
Score = 93.3 bits (102), Expect = 4e-14
Identities = 108/143 (76%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532
|||||| | | || || ||||| |||||||| || || ||||| ||||| ||| | |||
Sbjct 88882 TACCGGCAAAAATAAGTCGCTGCTGGTCCGGCGGAATTCCTTCCTTGTCT-TGAATCTTT 88940
Query 138533 GTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTC 138591
| ||||| | ||| | ||||| | | ||| || || | || | |||||||||||||
Sbjct 88941 GCTTTAACATTTTCGATAGTGTCAGAAGCCTCAACTTCCAAGGTGATCGTTTTACCAGTC 89000
Query 138592 AGAGTTTTTACAAAAATCTGCAT 138614
||||| |||||||| || |||||
Sbjct 89001 AGAGTCTTTACAAATATTTGCAT 89023
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 138473 TACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTT 138532
|||| | | | || |||||||||||||| || || |||||||| ||||| ||| |||||
Sbjct 88547 TACCCGCAAAAATAAGACGCTGTTGGTCAGGGGGAATACCTTCCTTGTC-CTGAATTTTT 88605
Query 138533 G-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTC 138591
| || | | ||| | || || | | || ||||| | ||| | ||||| ||||||
Sbjct 88606 GCCTTCACATTTTCAATTGTATCTGATGCTTCAACCTCCAACGTTATAGTTTTGCCAGTC 88665
Query 138592 AGAGTTTTTACAAAAATCTGCATG 138615
| ||||| |||||||||||||||
Sbjct 88666 AACGTTTTCACAAAAATCTGCATG 88689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496226557448160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |