Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq22 96.9 2e-15 >seq22 Length=171845 Score = 96.9 bits (106), Expect = 2e-15 Identities = 99/127 (78%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 15052 CGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTAT 15110 ||||| ||||| ||||||||||||||||| ||| ||||| ||| ||| |||| || Sbjct 88899 CGCTGCTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTTGC-TTTAACATTTTCGAT 88957 Query 15111 AGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAAT 15170 ||| || | || || || ||||| || |||||||| |||||||| |||||||| || Sbjct 88958 AGTGTCAGAAGCCTCAACTTCCAAGGTGATCGTTTTACCAGTCAGAGTCTTTACAAATAT 89017 Query 15171 TTGCATA 15177 ||||||| Sbjct 89018 TTGCATA 89024 Score = 82.4 bits (90), Expect = 5e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 15052 CGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATA 15111 ||||| || || |||||| |||||||| || |||||| || ||| |||| ||| Sbjct 89809 CGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCCTTCACATTTTCGATA 89868 Query 15112 GTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATT 15171 || ||| | ||| || || | ||| || || ||||| ||||| ||||| || |||||| Sbjct 89869 GTGTCGGAAGCTTCAACCTCGAGGGTGATAGTCTTACCAGTCAGTGTTTTCACGAAAATT 89928 Query 15172 TGCATATTTG 15181 |||||| ||| Sbjct 89929 TGCATACTTG 89938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357366832678730