Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq22 96.9 2e-15
>seq22
Length=171845
Score = 96.9 bits (106), Expect = 2e-15
Identities = 99/127 (78%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 15052 CGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTAT 15110
||||| ||||| ||||||||||||||||| ||| ||||| ||| ||| |||| ||
Sbjct 88899 CGCTGCTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTTGC-TTTAACATTTTCGAT 88957
Query 15111 AGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAAT 15170
||| || | || || || ||||| || |||||||| |||||||| |||||||| ||
Sbjct 88958 AGTGTCAGAAGCCTCAACTTCCAAGGTGATCGTTTTACCAGTCAGAGTCTTTACAAATAT 89017
Query 15171 TTGCATA 15177
|||||||
Sbjct 89018 TTGCATA 89024
Score = 82.4 bits (90), Expect = 5e-11
Identities = 96/130 (74%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 15052 CGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATA 15111
||||| || || |||||| |||||||| || |||||| || ||| |||| |||
Sbjct 89809 CGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCCTTCACATTTTCGATA 89868
Query 15112 GTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATT 15171
|| ||| | ||| || || | ||| || || ||||| ||||| ||||| || ||||||
Sbjct 89869 GTGTCGGAAGCTTCAACCTCGAGGGTGATAGTCTTACCAGTCAGTGTTTTCACGAAAATT 89928
Query 15172 TGCATATTTG 15181
|||||| |||
Sbjct 89929 TGCATACTTG 89938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357366832678730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |