Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq867 176 2e-38
seq283 170 8e-37
seq642 150 7e-31
seq22 107 8e-18
seq59 104 9e-17
>seq867
Length=25794
Score = 176 bits (194), Expect = 2e-38
Identities = 407/608 (67%), Gaps = 9/608 (1%)
Strand=Plus/Plus
Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972
||||||||||||||| | || || || | | ||||| |||||||| ||| ||||
Sbjct 13699 AGCAATTGGAATTGACTTAGGTACTACGTATAGTTGTGTTGGTGTTTATCAATATGGTCG 13758
Query 450973 TGTAGAAATTATAGCAAATGACCAAGG-ATCACGAACTACTCCTTCATGGGTAAGTTTTA 451031
|||||||| ||||| ||||||||||| | || |||||| || |||| || ||||
Sbjct 13759 AGTAGAAATAATAGCTAATGACCAAGGCAACAA-AACTACGCCATCATATGTTGCATTTA 13817
Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTAAATTCAAATGCCAA 451089
|||| ||| | | | || | | || | ||||| ||| | ||| | |
Sbjct 13818 CGGAAAGTGAACGTTTAATTGGTGATTCAGCATATGATCAA--GTAGCTCGTAATCCAGA 13875
Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149
||| ||| | | | ||||| || || || || | || | ||| | || ||
Sbjct 13876 AAATACAATTTTTTCAATAAAACGATTGATAGGACGAAAGTTAAACGATCCAAAAGTTCA 13935
Query 451150 AAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCA 451209
| |||| | || | | | | | ||| | | |||| || || || || |
Sbjct 13936 AGAAGATATGCGTTTATGGCCATTTAAAGTAATTTCTAAAAATGGCAAACCAGCAATCGA 13995
Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269
|||| | | ||| |||| ||| ||| |||| |||||||||||||||||| || |
Sbjct 13996 AGTAGAATTTAAGAATGAACAACGAACATTTACTCCAGAAGAAATTTCATCTATGATTTT 14055
Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329
| |||||||||||||||||| ||| | | | || | | | || | | | ||||| ||
Sbjct 14056 GAGTAAAATGAAAGAAACAGCTGAAATTTTTTTGGGATTTACTGTAAGTAAAGCAGTTAT 14115
Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389
|| || || || ||||| |||||| || || ||||| |||||||| || ||| |||
Sbjct 14116 CACAGTACCAGCATATTTTAATGATAGTCAGCGACAAGCGACTAAAGACGCTGGAATTAT 14175
Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||||| ||| | || | |||||||||||||| || |||||||| || ||||||||||
Sbjct 14176 CGCTGGATTAGACGTCTTGCGAATTATTAATGAGCCAACAGCAGCAGCATTAGCATATGG 14235
Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509
|| | || ||| || | | || ||||| || | |||||||| |||| |||||
Sbjct 14236 CCTTGATAA---GAAATTAAAAAATGATCAAAATGTTCTCATATTTGATCTTGGAGGAGG 14292
Query 451510 AACTCATG 451517
| ||||
Sbjct 14293 TATGCATG 14300
Score = 138 bits (152), Expect = 4e-27
Identities = 172/231 (74%), Gaps = 10/231 (4%)
Strand=Plus/Plus
Query 451989 TAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT 452048
||||||||||||| || || || ||||| || |||||||||||||||||||| || |
Sbjct 15677 TAAATCCTGATGAGGCAGTAGCTTATGGCGCAGCAGTTCAAGCAGCTATTCTCACTGACG 15736
Query 452049 CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAG 452108
| ||||| ||| | ||| | || |||| ||||| ||||| || ||| | ||
Sbjct 15737 TACGTGATGCAAATGTGAAAGACGTGTTGCTAGTTGATGTGACACCACTTTCTTTAGGTA 15796
Query 452109 TTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTA 452168
||||||| ||||||||| ||||||||| ||||||| ||||| ||| ||||| ||||
Sbjct 15797 TTGAAACTGCTGGTGGAGTGATGACTACTTTAATTGAACGAAATACTCGAATTCC-TGTA 15855
Query 452169 AAAAGAGTCAAACA--TTTAGTACA---GCAAGTGATAACCAACCAGGTGT 452214
|||| | ||||| | |||| |||| ||| |||| |||||||| ||
Sbjct 15856 AAAACA-TCAAAAATGTTTACTACATTTTCAA---ATAATCAACCAGGAGT 15902
>seq283
Length=65264
Score = 170 bits (188), Expect = 8e-37
Identities = 437/659 (66%), Gaps = 16/659 (2%)
Strand=Plus/Plus
Query 451840 AATGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGA 451899
|||| | || || || ||| || | |||| | ||||| ||| | | || | | ||
Sbjct 45835 AATGGATCCAGTAGAAAAAGCTTTGCGTGATGCAAAAATGGATAAGGCTCAAGTGCACGA 45894
Query 451900 AATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCA--AGATATGTT--GTCTT 451955
||||| || || || || ||||| || ||||||||| | || || || || | |||
Sbjct 45895 CATTGTTCTAGTTGGTGGCTCTACTCGTATTCCTAAAGTGCAGAAGTTACTTTCCGACTT 45954
Query 451956 CTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATG 452015
|| | | || ||| | | |||||| | ||||| |||||||||||||||||||
Sbjct 45955 TTTCTCT----GGCAAAGAGTTGAATAAGAGTATTAATCCCGATGAAGCTGTTGCATATG 46010
Query 452016 GTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGATA 452072
| || ||||||| ||||||||| || | || |||| | |||| | |||
Sbjct 46011 GGGCATCAGTTCAGGCAGCTATTTTATCTGG---AGATAAGTCTGAAGCTGTGCAGGATC 46067
Query 452073 TTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGA 452132
|||| | ||||||| | ||||| || | ||| ||||||| ||||| || | ||||
Sbjct 46068 TTCTACTTCTAGATGTCGCTCCTCTCTCCTTGGGAATTGAAACTGCTGGCGGTGTAATGA 46127
Query 452133 CTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAG 452192
|| | ||||| || ||| | || || ||||| | ||||| || | |||
Sbjct 46128 CTGCCCTCATTAAGCGTAATACTACCATCCCAACTAAAACGTCCCAAACCTTCACTACGT 46187
Query 452193 CAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACAC 452252
|| ||||| || ||||| ||||| || | |||||| || || ||||||||
Sbjct 46188 ATTCCGACAACCAGCCTGGTGTGTTGATTCAGGTTTATGAAGGTGAGCGAGCAATGACTA 46247
Query 452253 GAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAA 452312
||| |||||| || || |||| | || || || ||| || | ||
Sbjct 46248 AAGACAATAATCTGCTTGGTAAATTCGAGTTGTCTGGAATCCCACCTGCTCCCCGAGGTG 46307
Query 452313 CTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAG 452372
|||||||||||| | || | |||| ||||||| || ||||| || ||||| |||
Sbjct 46308 TCCCTCAAATTGAAGTAACGTTTGATATTGATGCGAACGGTATCCTGAATGTATCTGCTC 46367
Query 452373 TTGAAAAATCATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTA 452431
|| |||||| |||| ||| ||||| || ||||| ||||| |||||||| | | |
Sbjct 46368 AAGACAAATCAACTGGCAAA-CAGAACAAGATTACCATTACGAATGATAAGGGCAGGCTG 46426
Query 452432 TCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490
|| || || || || || | |||||| | ||||| || || | || | ||||||||
Sbjct 46427 TCGAAGGATGAAATCGAGAGGATGGTACAGGAAGCTGAGAAGTATAAAGCAGATGATGA 46485
Score = 87.8 bits (96), Expect = 7e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378
|| || ||| | || || || |||||||| |||||| | || || || ||||| || |||
Sbjct 45148 GACGCTGTAGTCACAGTCCCTGCTTATTTTAATGATTCCCAGCGTCAGGCAACAAAGGAT 45207
Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
|||| ||||| ||| | || || | || ||||||||||||||||||||||| ||
Sbjct 45208 TCAGGTGCCATTGCGGGTCTGAACGTGTTGCGTATTATTAATGAACCTACAGCAGCAGCA 45267
Query 451439 CTAGCATATGG 451449
| || |||||
Sbjct 45268 ATTGCCTATGG 45278
>seq642
Length=34890
Score = 150 bits (166), Expect = 7e-31
Identities = 176/237 (74%), Gaps = 3/237 (1%)
Strand=Plus/Minus
Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291
||||| || ||||| |||||||||||| |||||||||||||||||||||| | | ||
Sbjct 16617 AAAACCTTCGCTCCAGAAGAAATTTCAGCTATGGTTCTTACTAAAATGAAGAATATTGCT 16558
Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351
||| ||| | || ||||| |||| | | || || |||||||| ||||||
Sbjct 16557 GAATCGTATTTGGGAAAAGAAGTTAAGCATGCTATCGTGACAGTGCCCGCTTACTTCAAT 16498
Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411
||||| ||||| || || || |||||||| || |||||| || | ||||| | |||
Sbjct 16497 GATGCGCAACGTCAGGCTACCAAAGATGCGGGTTCTATTGCAGGCCTTAATGTCGTGCGA 16438
Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA 451468
|| || |||||||| || || |||||| | |||||||| |||| || |||||||
Sbjct 16437 ATAATCAATGAACCCACGGCTGCTGCTATTGCATATGGTCTAGACAA---AAAAGAA 16384
Score = 87.8 bits (96), Expect = 7e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540
|| ||| | || || ||| ||||||| || ||| |||| ||| | ||| |||| ||
Sbjct 16088 AACATTCTCGTTTTCGATCTTGGTGGCGGCACTTTTGATGTTTCATTGCTTACAATCGAT 16029
Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATT 451600
|||| || || ||||||| ||||| | ||||||||||||| | || ||||||||| ||
Sbjct 16028 AATGGCGTTTTCGAAGTAATAGCAACAAGTGGTGATACTCATTTGGGTGGTGAAGATTTT 15969
Query 451601 GAT 451603
|||
Sbjct 15968 GAT 15966
>seq22
Length=171845
Score = 107 bits (118), Expect = 8e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || ||||| |||||||| || || || ||| | || || || | |||
Sbjct 88348 ATGCAGATATTTGTCAAAACGCTGACTGGCAAGACGATCACTTTGGAGGTAGAGGCTTCT 88289
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| || ||||| |||||||| || || || || ||||||
Sbjct 88288 GATACGATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAGGGCATCCCACCAGATCAA 88229
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| || ||||| | || || || | |||||||| | || || | || || |||
Sbjct 88228 CAACGATTGATTTTTGCCGGAAAGCAGTTGGAAGATGGCCGCACACTGTCTGACTACAAT 88169
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | || || | |||||||| || ||
Sbjct 88168 ATTCAAAAAGAGTCCACACTTCATTTGGT 88140
Score = 107 bits (118), Expect = 8e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||||||||||||||| ||||| || || || |||||| | ||
Sbjct 89933 ATGCAAATTTTCGTGAAAACACTGACTGGTAAGACTATCACCCTCGAGGTTGAAGCTTCC 89874
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | || ||||| |||||||||||||| ||||| ||||||||
Sbjct 89873 GACACTATCGAAAATGTGAAGGCCAAAATCCAAGATAAGGAAGGTATTCCACCTGATCAG 89814
Query 391170 CAACGTTTAATTTT 391183
|| || |||||||
Sbjct 89813 CAGCGCCTAATTTT 89800
Score = 93.3 bits (102), Expect = 2e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || ||||||||||| || |||||||| || | || || ||| | |||
Sbjct 89579 ATGCAAATCTTTGTCAAAACACTGACCGGCAAAACTATAACGTTGGAAGTGGAAGCTTCT 89520
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| || ||||| ||||||||||| ||||| || |||||
Sbjct 89519 GATACCATTGAGAATGTAAAAGCTAAGATTCAGGATAAGGAAGGCATTCCACCGGATCAG 89460
Query 391170 CAACGTTTAATTTT 391183
||||| |||| ||
Sbjct 89459 CAACGCCTAATCTT 89446
Score = 86.0 bits (94), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112
||||||| || || || |||||||||||||| || || | || ||||| | |||||
Sbjct 89018 AATATTT--GTAAAGACTCTGACTGGTAAAACGATCACCTTGGAAGTTGAGGCTTCTGAC 88961
Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172
| || ||| | ||||| ||| |||||||| |||||||||||||| || || || ||
Sbjct 88960 ACTATCGAAAATGTTAAAGCAAAGATTCAAGACAAGGAAGGAATTCCGCCGGACCAGCAG 88901
Query 391173 CGTTTAATTTT 391183
|| | |||||
Sbjct 88900 CGACTTATTTT 88890
>seq59
Length=128137
Score = 104 bits (114), Expect = 9e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| ||||||||||||| ||||| ||||| || ||||| ||
Sbjct 72011 ATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACAATTACACTTGAGGTGGAATCGTCA 71952
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | |||| ||||| ||||| |||||||| || ||||| ||||||
Sbjct 71951 GACACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGCATCCCTCCGGATCAA 71892
Query 391170 CAACG 391174
|| ||
Sbjct 71891 CAGCG 71887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975572136332024
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