Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq867 286 3e-71
seq283 230 2e-54
seq14 100 2e-15
seq642 91.5 1e-12
>seq867
Length=25794
Score = 286 bits (316), Expect = 3e-71
Identities = 436/614 (71%), Gaps = 14/614 (2%)
Strand=Plus/Minus
Query 518107 TACAT--CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 518164
||||| |||| | || || || | |||||| || || ||||| || || | |
Sbjct 14307 TACATGGCATGCATACCTCCTCCAAGATCAAATATGAGAACATTTTGATCATTTTTTAAT 14248
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| |||||||| ||||| || || || || || ||||| ||||||||||||| ||| ||
Sbjct 14247 TTCTTATCAAGGCCATATGCTAATGCTGCTGCTGTTGGCTCATTAATAATTCGCAAGACG 14188
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
| | ||||| || |||| || |||||||| ||||||| || ||| |||||||||
Sbjct 14187 TCTAATCCAGCGATAATTCCAGCGTCTTTAGTCGCTTGTCGCTGACTATCATTAAAATAT 14128
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACT-TCTTTACCAATATAAGCGCTTGCCGTTTG 518343
|| || || || ||||| || | | |||| | | |||| | || | || ||||
Sbjct 14127 GCTGGTACTGTGATAACTGCTTTACTTACAGTAAATCCCAAAAAAATTTCA-GCTGTTTC 14069
Query 518344 TTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG--AATATTGCTTGGATTCA 518401
|||||||||||| |||||||| |||||||||| |||||| | ||| || ||| ||||
Sbjct 14068 TTTCATTTTACTCAAAATCATAGATGAAATTTCTTCTGGAGTAAATGTTCGTTG--TTCA 14011
Query 518402 TTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA---ATAACTTTAAATGGC 518458
|| | | || |||||| | |||||| ||| ||| || ||||||||||||
Sbjct 14010 TTCTTAAATTCTACTTCGATTGCTGGTTTG---CCATTTTTAGAAATTACTTTAAATGGC 13954
Query 518459 CAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTT 518518
|| | ||||||| |||||| || | || || || | || || || |||||||||
Sbjct 13953 CATAAACGCATATCTTCTTGAACTTTTGGATCGTTTAACTTTCGTCCTATCAATCGTTTT 13894
Query 518519 GCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATC 518578
|||||| ||||| ||||||| || |||||| | |||| ||| |||||
Sbjct 13893 ATTGAAAAAATTGTATTTTCTGGATTACGAGCTACTTGATCATATGCTGAATCACCAATT 13834
Query 518579 AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTC 518638
| | |||| | || ||||||| |||||||||||| || || || ||||| |||||
Sbjct 13833 AAACGTTCACTTTCCGTAAATGCAACATATGATGGCGTAGTTTTGTTGCCTTGGTCATTA 13774
Query 518639 GCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAA 518698
|| || ||||| ||| ||||| ||| | ||||| ||||||||| | || || |||||
Sbjct 13773 GCTATTATTTCTACTCGACCATATTGATAAACACCAACACAACTATACGTAGTACCTAAG 13714
Query 518699 TCAATACCAATAGC 518712
||||| ||||| ||
Sbjct 13713 TCAATTCCAATTGC 13700
Score = 131 bits (144), Expect = 1e-24
Identities = 189/264 (72%), Gaps = 2/264 (1%)
Strand=Plus/Minus
Query 517413 TAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGAT-TTTTTACAAGGAATT 517471
||||| | | |||||||| |||| | || ||||| | | | ||| |||||||| ||||||
Sbjct 15904 TAACTCCTGGTTGATTATTTGAAAATGTAGTAAACATTTTTGATGTTTTTACA-GGAATT 15846
Query 517472 GTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAA 517531
|| |||| ||||| | | | ||||| | ||||| || ||||| | ||| | ||||
Sbjct 15845 CGAGTATTTCGTTCAATTAAAGTAGTCATCACTCCACCAGCAGTTTCAATACCTAAAGAA 15786
Query 517532 AGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGA 517591
|| || || ||||||||||| | | | || | ||| ||||| | || |||
Sbjct 15785 AGTGGTGTCACATCAACTAGCAACACGTCTTTCACATTTGCATCACGTACGTCAGTGAGA 15726
Query 517592 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 517651
||||||||||||| || || ||||| || || || ||||||||||| | || | |||
Sbjct 15725 ATAGCTGCTTGAACTGCTGCGCCATAAGCTACTGCCTCATCAGGATTTATAGAATGATTA 15666
Query 517652 AGTTTTTTACCATTGAAAAAATTT 517675
|| | |||||| | | |||||||
Sbjct 15665 AGCTCTTTACCTATAAGAAAATTT 15642
Score = 89.7 bits (98), Expect = 4e-12
Identities = 99/132 (75%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303
|| ||||| | |||||||| ||||| |||||||| ||| | || ||||| || ||
Sbjct 14235 CCATATGCTAATGCTGCTGCTGTTGGCTCATTAATAATTCGCAAGACGTCTAATCCAGCG 14176
Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363
|| | ||| || ||| ||||||| ||| |||||||||||||||||||| ||
Sbjct 14175 ATAATTCCAGCGTCTTTAGTCGCTTGTCGCTGACTATCATTAAAATATGCTGGTACTGTG 14116
Query 322364 ATAACTGCTTTA 322375
||||||||||||
Sbjct 14115 ATAACTGCTTTA 14104
>seq283
Length=65264
Score = 230 bits (254), Expect = 2e-54
Identities = 514/767 (67%), Gaps = 10/767 (1%)
Strand=Plus/Minus
Query 517174 CATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTT 517233
||| ||||| |||| ||| | || | || || || ||| ||||| ||||| || ||
Sbjct 46450 CATCCTCTCGATTTCATCCTTCGACAGCCTGCCCTTATCATTCGTAATGGTAATCTTGTT 46391
Query 517234 GGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATC 517293
|||| |||||||| || |||| ||||| || ||||| || ||||| | |||
Sbjct 46390 CTGTTTGCCAGTTGATTTGTCTTGAGCAGATACATTCAGGATACCGTTCGCATCAATATC 46331
Query 517294 AAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAA 517353
||| || ||||||||||||||||| |||| ||||||||||||| || ||| | ||
Sbjct 46330 AAACGTTACTTCAATTTGAGGGACACCTCGGGGAGCAGGTGGGATTCCAGACAACTCGAA 46271
Query 517354 TGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGT 517413
| | || || |||||| |||||||| | | ||| ||||| || ||| || ||
Sbjct 46270 TTTACCAAGCAGATTATTGTCTTTAGTCATTGCTCGCTCACCTTCATAAACCTGAATCAA 46211
Query 517414 AACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGT 517473
|| ||| || || || ||||| || || || | ||| ||||| || || ||
Sbjct 46210 CACACCAGGCTGGTTGTCGGAATACGTAGTGAAGGTTTGGGACGTTTTAGTTGGGATGGT 46151
Query 517474 TGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAG 517533
|| || | | ||| | ||||| | ||| || || ||||| | || | || ||
Sbjct 46150 AGTATTACGCTTAATGAGGGCAGTCATTACACCGCCAGCAGTTTCAATTCCCAAGGAGAG 46091
Query 517534 AGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAAT 517593
||||| |||||| | || | || || || | |||| | | ||| | |||
Sbjct 46090 AGGAGCGACATCTAGAAGTAGAAGATCCTGCACAGCTTCAGACTTATCTCCAGATAAAAT 46031
Query 517594 AGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAG 517653
|||||| |||| | || |||||||||||||||||||| ||||||| | | | ||| |
Sbjct 46030 AGCTGCCTGAACTGATGCCCCATATGCAACAGCTTCATCGGGATTAATACTCTTATTCAA 45971
Query 517654 TTTTTTACCATTGAAAAAATTTGAAAG-AAGTTGTCTTACCTTAGGAATACGAGATGATC 517712
| ||| ||| |||||| | ||||| || || | || ||||||||||||| || |
Sbjct 45970 CTCTTTGCCAGAGAAAAAGTCGGAAAGTAACTTCT-GCACTTTAGGAATACGAGTAGAGC 45912
Query 517713 CTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTT 517772
| ||||||| ||||| || ||||| || | ||||||| ||||| ||| ||| |||
Sbjct 45911 CACCAACTAGAACAATGTCGTGCACTTGAGCCTTATCCATTTTTGCATCACGCAAAGCTT 45852
Query 517773 TTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTC 517832
|||| || || || | | | ||||| |||| || || ||||| || || |
Sbjct 45851 TTTCTACTGGATCCATTGTTGAGCGGAACAAATCTGCGCAGAGCTCTTCAAAACGGGCAC 45792
Query 517833 TAGTAAGA---GTGACATTATAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTA 517888
||||| | ||| || || || || || ||||||| ||||| | || || |
Sbjct 45791 GAGTAATACTTGTG----TAGAAGTCGATACCCTCGAACAGTGAATCGATCTCGATACTT 45736
Query 517889 GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT 517935
| ||| | ||| || | | ||||| || | ||||||||| ||
Sbjct 45735 GCTTGTGACGAGCTGGACAACGTCCGTTTTGCTCTTTCACATGCAGT 45689
Score = 93.3 bits (102), Expect = 3e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|||||||| | |||||| |||| || || || || |||||||||||||| | ||| ||
Sbjct 45290 TTTTTATCTAAACCATAGGCAATTGCTGCTGCTGTAGGTTCATTAATAATACGCAACACG 45231
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
|| ||||| ||||| |||| ||| || || || || | || ||||| ||||||||
Sbjct 45230 TTCAGACCCGCAATGGCACCTGAATCCTTTGTTGCCTGACGCTGGGAATCATTAAAATAA 45171
Query 518285 GCAGGAACAGT 518295
||||| || ||
Sbjct 45170 GCAGGGACTGT 45160
>seq14
Length=197575
Score = 100 bits (110), Expect = 2e-15
Identities = 114/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 668854 AGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACG 668913
||| || ||||| ||||| ||||||||||||||||||||||| || ||| | || || ||
Sbjct 69556 AGGAAAGGAAGGCCGTATCAGAGGAAATTTGATGGGAAAACGAGTAGATTTTTCAGCTCG 69497
Query 668914 TACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTAT 668973
|| || ||||| | ||||| ||| | | | || ||| ||||| || | || |||
Sbjct 69496 AACTGTAATTACACCAGATCCAAATTTACCCATAGATACAGTCGGTGTACCGCGTACTAT 69437
Query 668974 TGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
|||| ||||| | || ||| |||||||| ||
Sbjct 69436 TGCTCAAAATATGACATTTCCAGAAATTGTCAC 69404
>seq642
Length=34890
Score = 91.5 bits (100), Expect = 1e-12
Identities = 166/242 (69%), Gaps = 6/242 (2%)
Strand=Plus/Plus
Query 518447 ACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCA 518506
|| ||||| ||||| | | | |||||| ||||| || | || | |||| |||
Sbjct 16732 ACCTTAAAAGGCCAATGTCTAATATCTTGCTGAACTTTTGGATCCGAGTATTCTCGACCG 16791
Query 518507 ATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCT 518566
|| || ||||| |||| || | ||||| |||||| | | |||| || |||
Sbjct 16792 ATCAAACGTTTAACATCGAAGACTGTATTTTCTGGATTGGTAGTTAACTGATTCTTTGCT 16851
Query 518567 GCATCTCCAATCAGATGTTC-----TGTCTCTG-TAAATGAAACATATGATGGAGTTGTG 518620
||||| ||||||||| |||| | || || | |||| |||||||||||| || |
Sbjct 16852 GCATCACCAATCAGACGTTCACCACTTTCGCTCATGAATGCAACATATGATGGTGTAATT 16911
Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680
| ||||| || ||||| || |||||||| ||| ||||||| | || || ||||||
Sbjct 16912 CTGTTACCCTGTTCATTAGCTATAATTTCCACTCGTCCATTTTTATAAACGCCGACACAA 16971
Query 518681 CT 518682
||
Sbjct 16972 CT 16973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780535676607268
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