Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq283 307 1e-78
seq642 152 7e-32
seq867 145 1e-29
seq96 82.4 1e-10
>seq283
Length=65264
Score = 307 bits (340), Expect = 1e-78
Identities = 587/862 (68%), Gaps = 2/862 (0%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || |||||||||| || || || || |||||| | || || || || |||||
Sbjct 46485 TCATCATCTGCTTTATACTTCTCAGCTTCCTGTACCATCCTCTCGATTTCATCCTTCGAC 46426
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTC 6687
| || ||||||||||||||||| |||||||| ||| | ||| || | | || ||||
Sbjct 46425 AGCCTGCCCTTATCATTCGTAATGGTAATCTTGTTCTG-TTTGCCAGTTGATTTGTCTTG 46367
Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747
|||| |||||||| ||||| || ||||||| ||| ||| |||| | |||||| ||
Sbjct 46366 AGCAGATACATTCAGGATACCGTTCGCATCAATATCAAACGTTACTTCAATTTGAGGGAC 46307
Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807
||| | || || | ||| || || | || || ||| ||||||| | | | || || |
Sbjct 46306 ACCTCGGGGAGCAGGTGGGATTCCAGACAACTCGAATTTACCAAGCAGATTATTGTCTTT 46247
Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867
| | | || ||||||||||| || | ||| ||| |||| || || ||
Sbjct 46246 AGTCATTGCTCGCTCACCTTCATAAACCTGAATCAACACACCAGGCTGGTTGTCGGAATA 46187
Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927
||| | |||| |||| | |||| ||| || || ||||| | | ||| | | ||
Sbjct 46186 CGTAGTGAAGGTTTGGGACGTTTTAGTTGGGATGGTAGTATTACGCTTAATGAGGGCAGT 46127
Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987
||| | ||| || |||||| | ||| | || ||||| | || || | |||| ||
Sbjct 46126 CATTACACCGCCAGCAGTTTCAATTCCCAAGGAGAGAGGAGCGACATCTAGAAGTAGAAG 46067
Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047
|| || |||| ||| | || || | ||| || || || || || | ||||| ||
Sbjct 46066 ATCCTGCACAGCTTCAGACTTATCTCCAGATAAAATAGCTGCCTGAACTGATGCCCCATA 46007
Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGA 7107
||| || || |||||||| ||||| | ||||||| ||||| || ||| | || ||
Sbjct 46006 TGCAACAGCTTCATCGGGATTAATACTCTTATTCAACTCTTTGCCAGAGAAAAAGTCGGA 45947
Query 7108 TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCAC 7167
| | | || | ||| || || || || || ||||| || | ||| || || | |||
Sbjct 45946 AAGTAACTTCTGCACTTTAGGAATACGAGTAGAGCCACCAACTAGAACAATGTCGTGCAC 45887
Query 7168 TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACG 7227
|| | ||||| || |||| || || | | |||||| || || ||||| | ||
Sbjct 45886 TTGAGCCTTATCCATTTTTGCATCACGCAAAGCTTTTTCTACTGGATCCATTGTTGAGCG 45827
Query 7228 GAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAAC 7287
|||||| || || || || |||||||| ||||| ||||| ||| ||||| || |
Sbjct 45826 GAACAAATCTGCGCAGAGCTCTTCAAAACGGGCACGAGTAATACTTGTGTAGAAGTCGAT 45767
Query 7288 GCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTT 7347
|| ||| | | ||||| || || || ||| ||||| || || ||||| || ||
Sbjct 45766 ACCCTCGAACAGTGAATCGATCTCGATACTTGCTTGTGACGAGCTGGACAACGTCCGTTT 45707
Query 7348 TGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTT 7407
||| | ||||| || || || || || ||||||||||| || || || | || ||
Sbjct 45706 TGCTCTTTCACATGCAGTACGCAACCGCCGAAGGGCACGAGGATTCGAGGCCAAGTCCTT 45647
Query 7408 CTTATGTTTACGTTTAAACTCT 7429
|||||||||||||||||| |||
Sbjct 45646 CTTATGTTTACGTTTAAATTCT 45625
Score = 86.0 bits (94), Expect = 8e-12
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACA 7653
|| ||||| | ||| || || || || || || || ||||||||||||||||| || ||
Sbjct 45290 TTTTTATCTAAACCATAGGCAATTGCTGCTGCTGTAGGTTCATTAATAATACGCAACAC- 45232
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
|||||| || ||||| | | | ||| || || || || || || ||||| ||||| ||
Sbjct 45231 GTTCAGACCCGCAATGGCACCTGAATCCTTTGTTGCCTGACGCTGGGAATCATTAAAATA 45172
Query 7714 GGCCGGGACCGTTACGACCGCGTC 7737
|| ||||| || || || |||||
Sbjct 45171 AGCAGGGACTGTGACTACAGCGTC 45148
>seq642
Length=34890
Score = 152 bits (168), Expect = 7e-32
Identities = 165/216 (76%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACA 7653
|| || || ||||| || || ||||| || ||||| |||||||| || || || | ||||
Sbjct 16388 TTTTTGTCTAGACCATATGCAATAGCAGCAGCCGTGGGTTCATTGATTATTCGCACGACA 16447
Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713
|| ||||| ||||||| |||||||||| || || || ||||||| ||| || |||||
Sbjct 16448 -TTAAGGCCTGCAATAGAACCCGCATCTTTGGTAGCCTGACGTTGCGCATCATTGAAGTA 16506
Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773
|| || || || |||| || | | | |||| || || | ||||||||| || ||||
Sbjct 16507 AGCGGGCACTGTCACGATAGCATGCTTAACTTCTTTTCCCAAATACGATTCAGCAATATT 16566
Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|||||||| ||||||||||| | |||||| |||||
Sbjct 16567 CTTCATTTTAGTAAGAACCATAGCTGAAATTTCTTC 16602
>seq867
Length=25794
Score = 145 bits (160), Expect = 1e-29
Identities = 402/609 (66%), Gaps = 18/609 (3%)
Strand=Plus/Minus
Query 7548 TACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGAC 7607
|||| || || || ||||| ||||| || || ||| | | | |||||||| || |
Sbjct 14294 TACCTCCTCCAAGATCAAATATGAGAACATTTTGATCATTTTTTAATTTCTTATCAAGGC 14235
Query 7608 CGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCA 7666
| || || | || || || ||||| ||||||||||| || ||||| || | |||||
Sbjct 14234 CATATGCTAATGCTGCTGCTGTTGGCTCATTAATAATTCGCAAGAC-GTCTAATCCAGCG 14176
Query 7667 ATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTT 7726
||| || | || ||||| ||||||||||| || ||| ||||| || || || || ||
Sbjct 14175 ATAATTCCAGCGTCTTTAGTCGCTTGTCGCTGACTATCATTAAAATATGCTGGTACTGTG 14116
Query 7727 ACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTA 7786
| || || | | || | || | | | ||| || | ||||||||||| |
Sbjct 14115 ATAACTGCTTTACTTACAGTAAATCCCAAAAAAATTTCAGCTGTTTCTTTCATTTTACTC 14056
Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGT--TTCACCGTTAAAATCAA 7844
| || ||| |||||||| ||||| | | ||| || ||||| |||| ||||| || |
Sbjct 14055 AAAATCATAGATGAAATTTCTTCTGGAGTAAA-TG-TTCGTTGTTCATTCTTAAATTCTA 13998
Query 7845 CTTCAATCATGGGTTT---ATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCA 7901
|||| || ||||| || || | || || ||| | | ||| ||
Sbjct 13997 CTTCGATTGCTGGTTTGCCATTTTTAGAA------ATTACTTTAAATGGCCATAAACGCA 13944
Query 7902 TATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAA 7961
|||| ||||| || | | | || ||||||| ||| || | || ||| |||||
Sbjct 13943 TATCTTCTTGAACTTTTGGATCGTTTAACTTTCGTCCTATCAATCGTTTTATTGAAAAAA 13884
Query 7962 CTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCAT 8021
||| |||| || || ||| ||| | | || | || || || | ||||||
Sbjct 13883 TTGTATTTTCTGGATTACGAGCTACTTGATCATATGCTGAATCACCAATTAAACGTTC-- 13826
Query 8022 TATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAA 8081
| |||||||||| || || || ||||| || ||| || |||||||| || || || |
Sbjct 13825 -ACTTTCCGTAAATGCAACATATGATGGCGTAGTTTTGTTGCCTTGGTCATTAGCTATTA 13767
Query 8082 TTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATAC 8141
||||||| || | | ||| | || || || || |||||| || ||||| ||||| |
Sbjct 13766 TTTCTACTCGACCATATTGATAAACACCAACACAACTATACGTAGTACCTAAGTCAATTC 13707
Query 8142 CGATTGCTT 8150
| |||||||
Sbjct 13706 CAATTGCTT 13698
Score = 104 bits (114), Expect = 3e-17
Identities = 308/468 (66%), Gaps = 9/468 (2%)
Strand=Plus/Minus
Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149
||| |||||| | || || | | || |||||| || || || | || || ||||| ||
Sbjct 15410 ACCATTAAAAAATTCAGAAAGTAATTTTTGAATCTTTGGAATCCTCGTTGAACCACCAAC 15351
Query 7150 CAAAACGATTTCATTCACTTTC--GATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCG 7207
|| || | |||||| | |||| | ||| | || | || || || |||||
Sbjct 15350 TAATACTACTTCATTAA-TTTCATGCTTTTTTAGTCGGGCATCTTCCAA-TGCATTTTCT 15293
Query 7208 ACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTA 7267
||||||| | ||| |||||||| || || | ||| ||||| | || || |
Sbjct 15292 ACAGGTTTTAATGTTTTTCGGAACAAATCACCGCATAATTCTTCAAATCTCGCTCGAGAT 15233
Query 7268 ATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCC 7327
|| || | ||| |||||| ||| || || | ||| ||||| || |||| ||| |
Sbjct 15232 ATTGAAGAATAAAAATCAGTGCCTTCATACAGACTATCTATTTCGATAGTTGCTTGAGTA 15173
Query 7328 GTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGC 7387
| ||||||||||| ||||| | ||||| | || ||||| || || | | |||
Sbjct 15172 GAGCTTGATAACGTTCGTTTTGCTCTTTCACATGTTGTACGTAATCGCCGTAATGAACGT 15113
Query 7388 GGGTTACCGGAAATATC-TTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAG 7446
|| ||| | ||||| |||| | | |||||||||||| || | | ||| | |||
Sbjct 15112 GGACTACGTGTGATATCATTTCCTGT-TTTACGTTTAAATTCATTTGTGAAAAATTGAAC 15054
Query 7447 GAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTC 7506
|||| ||| |||||||||||||| | || |||| || || || || ||||| ||
Sbjct 15053 AAGTCGATCATCAAAATCTTCACCACCAAGATGAGTATTTCCAGCAGTGGCCTTGACCTC 14994
Query 7507 AAAGATACCTCCTTCAATGTTT---AACAACGAAACATCAAACGTACC 7551
|| | ||||||| | || | | ||||||||||| || ||
Sbjct 14993 GAAAAGTGATCCTTCAGCGATTGAAAGTATTGAAACATCAAATGTGCC 14946
Score = 82.4 bits (90), Expect = 1e-10
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746
||||| ||| | ||||| ||||||||||| | ||| || |||| | |||||||||
Sbjct 16374 CAGCAGCAACACTTAAAATTCCATTTGCATCGATATCAAATGTTACTTCAATTTGTGGGA 16315
Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806
| || | || || | ||| || ||| |||||||||| |||| || | | | |||||
Sbjct 16314 TTCCACGTGGAGCTGGTGGTATTCCCATTAAATCAAAATTACCTAGCATATTATTATCTT 16255
Query 6807 TCGCCTTCTTACGTTCACCTTCA 6829
| | | | ||||||||||||||
Sbjct 16254 TTGTCATGCTACGTTCACCTTCA 16232
>seq96
Length=108103
Score = 82.4 bits (90), Expect = 1e-10
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 184231 TTTACCCCTAAGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAAT 184290
|||||| | | ||||||||||| ||| ||||||||||||| || | |||| ||
Sbjct 22460 TTTACCACGCAAAGGAAAAACACCATAACGATCACGACCAACTACACCTAAGCCAGAAAC 22401
Query 184291 TGCAAGTGTTTTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGT 184350
|| || | || || ||||| ||||| || | || || || ||| | ||| | | |
Sbjct 22400 GGCCAGAGACTTGGCCGAATCTCCTTCAGTGAGTATCAGCGTGCACATGGAAGAATTTTT 22341
Query 184351 GGTACCGGCTTTATTGGCATCGTCGAGTTTTGGAATACCC 184390
|| || || | ||||||||| || |||||||| ||||||
Sbjct 22340 AGTTCCTGCATCATTGGCATCTTCTAGTTTTGGTATACCC 22301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635086927533520
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