Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq22 109 4e-19 >seq22 Length=171845 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| |||| ||||| ||||| || ||||| || || | || |||| || Sbjct 88139 AACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCAGACAGTGTGCGGCCATCTTC 88198 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| ||||||||||| || | |||||| || ||| | || | |||||||| || Sbjct 88199 CAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGTGGGATGCCCTCCTTATCCTG 88258 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| |||||| | | |||| ||| ||||| || || | || || || || Sbjct 88259 AATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCTCTACCTCCAAAGTGATCGTCTT 88318 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || || ||||| |||||||| Sbjct 88319 GCCAGTCAGCGTTTTGACAAATATCTGCAT 88348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324610739504784