Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq546 152 4e-32
seq22 152 4e-32
seq59 113 4e-20
>seq546
Length=41299
Score = 152 bits (168), Expect = 4e-32
Identities = 119/142 (84%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||||||||| || | | || ||||| ||||||||||||||||| || ||||||||
Sbjct 26449 TACCTGCAAAAATGAGTCTTTGCTGATCAGGCGGAATGCCTTCTTTGTCCTGAATTTTAG 26508
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||||||| |||| | ||| ||||| | ||| ||||||||||||| |||||||||||||
Sbjct 26509 ATTTTACATTTTCGATAGTATCAGATGCTTCTACTTCAAGAGTGATTGTTTTGCCGGTTA 26568
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||||||| ||||||||||||||
Sbjct 26569 AAGTTTTAACAAATATCTGCAT 26590
>seq22
Length=171845
Score = 152 bits (168), Expect = 4e-32
Identities = 164/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| |||||||| || || |||||||| |||||||| || | | || | | |
Sbjct 88133 ACGGAGAACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCAGACAGTGTGCGGCC 88192
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| ||||| ||||| || ||||| ||||| || |||||||| || || ||||| || ||
Sbjct 88193 ATCTTCCAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGTGGGATGCCCTCCTT 88252
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||| ||||| || ||| ||| |||| | || ||||| | || || || | |||||
Sbjct 88253 ATCCTGAATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCTCTACCTCCAAAGTGAT 88312
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
||| ||||| || | ||||| |||||||||||||||
Sbjct 88313 CGTCTTGCCAGTCAGCGTTTTGACAAATATCTGCATG 88349
Score = 113 bits (124), Expect = 4e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| ||||| || | ||||| || || |||||||| ||||| || |||||||| |||
Sbjct 88882 TACCGGCAAAAATAAGTCGCTGCTGGTCCGGCGGAATTCCTTCCTTGTCTTGAATCTTTG 88941
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
||| ||| |||| | ||||||||| | || ||||| | |||| |||||| || || |
Sbjct 88942 CTTTAACATTTTCGATAGTGTCAGAAGCCTCAACTTCCAAGGTGATCGTTTTACCAGTCA 89001
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||| ||||||||||| |||||
Sbjct 89002 GAGTCTTTACAAATATTTGCAT 89023
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 101329 ACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTG 101388
||| ||||| || | || || ||||| || ||||||||||| ||||| ||||| ||
Sbjct 89439 ACCAGCAAAGATTAGGCGTTGCTGATCCGGTGGAATGCCTTCCTTATCCTGAATCTTAGC 89498
Query 101389 TTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAA 101448
||||||| | || | || ||||| | ||||||||| | || | ||||||||||| |
Sbjct 89499 TTTTACATTCTCAATGGTATCAGAAGCTTCCACTTCCAACGTTATAGTTTTGCCGGTCAG 89558
Query 101449 AGTTTTTACAAATATCTGCAT 101469
||||| ||||| || |||||
Sbjct 89559 TGTTTTGACAAAGATTTGCAT 89579
>seq59
Length=128137
Score = 113 bits (124), Expect = 4e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 101328 TACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| |||||||| | ||||||||||| || || |||||||| || ||||| |||||
Sbjct 71870 TACCAGCAAATATAAGGCGCTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATTTTAG 71929
Query 101388 GTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTA 101447
|| ||| |||| | ||||| |||| |||||| ||||| || | ||||| || || |
Sbjct 71930 CCTTAACATTTTCAATTGTGTCTGACGATTCCACCTCAAGTGTAATTGTTTTACCAGTCA 71989
Query 101448 AAGTTTTTACAAATATCTGCAT 101469
||||||| ||||| || |||||
Sbjct 71990 AAGTTTTAACAAAAATTTGCAT 72011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396250494322746
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |