Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq22 143 2e-29
seq59 91.5 1e-13
>seq22
Length=171845
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||||||| || ||| |||||||||||||||||| ||||| || | || | || |||
Sbjct 88140 ACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCAGACAGTGTGCGGCCATCTTCC 88199
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677
|||||||| |||||||| |||| ||| |||||||| | || | ||||||||| || |
Sbjct 88200 AACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGTGGGATGCCCTCCTTATCCTGA 88259
Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737
||||| ||| ||| | | | || || ||||| ||||||| || ||||| ||
Sbjct 88260 ATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCTCTACCTCCAAAGTGATCGTCTTG 88319
Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||| ||||| ||||| ||||||||
Sbjct 88320 CCAGTCAGCGTTTTGACAAATATCTGCAT 88348
Score = 89.7 bits (98), Expect = 4e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 48625 TACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTT 48684
|||| ||||| || || |||||||| || | ||||| || |||||||| ||| |||
Sbjct 88547 TACCCGCAAAAATAAGACGCTGTTGGTCAGGGGGAATACCTTCCTTGTCCTGAATTTTTG 88606
Query 48685 GTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCA 48744
|| ||| | | | ||||| || || ||||||| ||| || ||||| || ||||
Sbjct 88607 CCTTCACATTTTCAATTGTATCTGATGCTTCAACCTCCAACGTTATAGTTTTGCCAGTCA 88666
Query 48745 AAGTTTTTACAAAAATCTGCAT 48766
| ||||| ||||||||||||||
Sbjct 88667 ACGTTTTCACAAAAATCTGCAT 88688
>seq59
Length=128137
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 48625 TACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTT 48684
|||| |||||||| || ||||||||||||| || | ||| |||||||| || ||
Sbjct 71870 TACCAGCAAATATAAGGCGCTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATTTTAG 71929
Query 48685 GTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCA 48744
|| ||| | | | ||||||| |||||||| | ||||| ||||| || ||||
Sbjct 71930 CCTTAACATTTTCAATTGTGTCTGACGATTCCACCTCAAGTGTAATTGTTTTACCAGTCA 71989
Query 48745 AAGTTTTTACAAAAATCTGCATC 48767
||||||| |||||||| ||||||
Sbjct 71990 AAGTTTTAACAAAAATTTGCATC 72012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380910774612294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |