Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq22 111 1e-19
seq546 95.1 1e-14
seq59 93.3 4e-14
>seq22
Length=171845
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | |||||||| || || || || || || | || ||||| || |
Sbjct 88348 ATGCAGATATTTGTCAAAACGCTGACTGGCAAGACGATCACTTTGGAGGTAGAGGCTTCT 88289
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| || ||| ||||| || || || || || || || || ||||||
Sbjct 88288 GATACGATTGAAAATGTCAAAGCCAAGATTCAGGATAAGGAGGGCATCCCACCAGATCAA 88229
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||||| ||||| |||||||| || ||| |||| ||| | | |||| || || ||
Sbjct 88228 CAACGATTGATTTTTGCCGGAAAGCAGTTGGAAGATGGCCGCACACTGTCTGACTACAAT 88169
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|||||||| || || ||||| || |||||
Sbjct 88168 ATTCAAAAAGAGTCCACACTTCATTTGGT 88140
>seq546
Length=41299
Score = 95.1 bits (104), Expect = 1e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| ||||||| ||||||| ||||| || || || ||||||||||| |
Sbjct 26590 ATGCAGATATTTGTTAAAACTTTAACCGGCAAAACAATCACTCTTGAAGTAGAAGCATCT 26531
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | |||| |||||| || || || ||||||||||| || || || |||||
Sbjct 26530 GATACTATCGAAAATGTAAAATCTAAAATTCAGGACAAAGAAGGCATTCCGCCTGATCAG 26471
Query 24824 CAACGTTTGATCTTTGCCGG 24843
||| | | || ||||| ||
Sbjct 26470 CAAAGACTCATTTTTGCAGG 26451
>seq59
Length=128137
Score = 93.3 bits (102), Expect = 4e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || ||| ||||||| | || |||||||| ||||| || || || ||| | |
Sbjct 72012 GATGCAAATTTTTGTTAAAACTTTGACTGGTAAAACAATTACACTTGAGGTGGAATCGTC 71953
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | |||| || || || ||||||||||| ||||| || ||||| |||||
Sbjct 71952 AGACACAATTGAAAATGTTAAGGCTAAAATCCAAGACAAGGAAGGCATCCCTCCGGATCA 71893
Query 24823 ACAACGTTTGATCTTTGCCGG 24843
||| || | || ||||| ||
Sbjct 71892 ACAGCGCCTTATATTTGCTGG 71872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449865106145840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |