Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq22 105 4e-18 >seq22 Length=171845 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| |||| ||| ||| || ||||| || ||||| || || |||| |||| Sbjct 88137 AGAACCAAATGAAGTGTGGACTCTTTTTGAATATTGTAGTCAGACAGTGTGCGGCCATCT 88196 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||||||||| || |||| |||||| || ||| | || | |||||||| || Sbjct 88197 TCCAACTGCTTTCCGGCAAAAATCAATCGTTGTTGATCTGGTGGGATGCCCTCCTTATCC 88256 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | |||| ||| ||||| || || | || || ||| Sbjct 88257 TGAATCTTGGCTTTGACATTTTCAATCGTATCAGAAGCCTCTACCTCCAAAGTGATCGTC 88316 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || || || || ||||| ||||||||| Sbjct 88317 TTGCCAGTCAGCGTTTTGACAAATATCTGCATG 88349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325669864916582