Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq546 132 8e-26 >seq546 Length=41299 Score = 132 bits (146), Expect = 8e-26 Identities = 116/142 (82%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| ||||| | ||||| ||||| || |||||||| ||| |||| |||||| ||| Sbjct 26589 TGCAGATATTTGTTAAAACTTTAACCGGCAAAACAATCACTCTTGAAGTAGAAGCATCT- 26531 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||||||| ||||||||||| |||||| || |||||||||||||| || ||||| Sbjct 26530 GATACTATCGAAAATGTAAAATCTAAAATTCAGGACAAAGAAGGCATTCCGCCTGATCAG 26471 Query 146151 CAAAGACTCATTTTTGCAGGTA 146172 |||||||||||||||||||||| Sbjct 26470 CAAAGACTCATTTTTGCAGGTA 26449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786109619131760