Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq22 113 1e-19
>seq22
Length=171845
Score = 113 bits (124), Expect = 1e-19
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||||||| ||||||||| || || || |||||||||||||| || || ||||||
Sbjct 88345 CAGATATTTGTCAAAACGCTGACTGGCAAGACGATCACTTTGGAGGTAGAGGCTTCTGAT 88286
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| | ||| || ||||| || |||||| || || || || || || || ||
Sbjct 88285 ACGATTGAAAATGTCAAAGCCAA-GATTCAGGATAAGGAGGGCATCCCACCAGATCAACA 88227
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| || | || || ||||||||||||||||||||||| | || || | || ||||| |
Sbjct 88226 ACGATTGATTTTTGCCGGAAAGCAGTTGGAAGATGGCCGCACACTGTCTGACTACAATAT 88167
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||||| || ||||| | ||| | | |||||
Sbjct 88166 TCAAAAAGAGTCCACACTTCATTTGGTTCTCCGTCTTCG 88128
Score = 98.7 bits (108), Expect = 2e-15
Identities = 106/138 (77%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|| |||||| || || || || || ||||||||||| |||||||| || |||||||
Sbjct 89020 CAAATATTTGTAAAGACTCTGACTGGTAAAACGATCACCTTGGAAGTTGAGGCTTCTGAC 88961
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| ||||| || |||||||| ||||||||| || ||||||||| ||||||| ||
Sbjct 88960 ACTATCGAAAATGTTAAAGCAAA-GATTCAAGACAAGGAAGGAATTCCGCCGGACCAGCA 88902
Query 206292 AAGACTTATCTTCGCCGG 206309
||||||| || |||||
Sbjct 88901 GCGACTTATTTTTGCCGG 88884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181733309067538
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |