Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq22 113 1e-19 >seq22 Length=171845 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||||||| || || || |||||||||||||| || || |||||| Sbjct 88345 CAGATATTTGTCAAAACGCTGACTGGCAAGACGATCACTTTGGAGGTAGAGGCTTCTGAT 88286 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || |||||| || || || || || || || || Sbjct 88285 ACGATTGAAAATGTCAAAGCCAA-GATTCAGGATAAGGAGGGCATCCCACCAGATCAACA 88227 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || | || || ||||||||||||||||||||||| | || || | || ||||| | Sbjct 88226 ACGATTGATTTTTGCCGGAAAGCAGTTGGAAGATGGCCGCACACTGTCTGACTACAATAT 88167 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || |||||||| || ||||| | ||| | | ||||| Sbjct 88166 TCAAAAAGAGTCCACACTTCATTTGGTTCTCCGTCTTCG 88128 Score = 98.7 bits (108), Expect = 2e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || || || || ||||||||||| |||||||| || ||||||| Sbjct 89020 CAAATATTTGTAAAGACTCTGACTGGTAAAACGATCACCTTGGAAGTTGAGGCTTCTGAC 88961 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || |||||||| ||||||||| || ||||||||| ||||||| || Sbjct 88960 ACTATCGAAAATGTTAAAGCAAA-GATTCAAGACAAGGAAGGAATTCCGCCGGACCAGCA 88902 Query 206292 AAGACTTATCTTCGCCGG 206309 ||||||| || ||||| Sbjct 88901 GCGACTTATTTTTGCCGG 88884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181733309067538