Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4836 100 4e-15
seq4674 91.5 2e-12
seq2330 91.5 2e-12
seq982 91.5 2e-12
>seq4836
Length=696
Score = 100 bits (110), Expect = 4e-15
Identities = 130/178 (73%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 724965 AAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAG 725024
||| | |||||||| ||||||||||||||||||||| | |||| ||||||| |||||
Sbjct 291 AAGGCGATGTCGATTATGAACTCGTTTGTCAACGACGTCTTCGAACGCATCGCAGCCGAG 350
Query 725025 GCCGGTCGCCTGGCGCGCTCCAACAAGCG--CAACACGATCGGCACGCGCGAGATCCAGA 725082
|| |||| || || | | ||| ||||| |||| ||| |||| ||||| || |
Sbjct 351 GCAAGTCGTCTTGCACATTACAATAAGCGGTCAACTATATC--ATCGCGTGAGATTCAAA 408
Query 725083 CCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
| || || || || || ||| || || ||||| | |||||| || || || |||||
Sbjct 409 CTGCAGTACGGCTCATTTTGCCAGGTGAGCTGGCAAAGCACGCGGTATCGGAAGGCAC 466
>seq4674
Length=729
Score = 91.5 bits (100), Expect = 2e-12
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| |||||||||||||| | |||| ||||||| ||||||| ||
Sbjct 188 ATGTCAATTATGAATTCGTTTGTCAACGATGTCTTCGAGCGCATCGCAGCCGAGGCAAGT 129
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | | |||||| || || || |||| |||||||| || || ||
Sbjct 128 CGTCTTGCACATTACAACAAACGGTCAACCATTTCATCGCGTGAGATCCAAACTGCAGTA 69
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || ||| || |||||||| | |||||| || || || |||||
Sbjct 68 CGTCTCATTTTGCCAGGTGAACTGGCAAAGCACGCGGTGTCAGAAGGCAC 19
>seq2330
Length=3889
Score = 91.5 bits (100), Expect = 2e-12
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| |||||||||||||| | |||| ||||||| ||||||| ||
Sbjct 1251 ATGTCAATTATGAATTCGTTTGTCAACGATGTCTTCGAGCGCATCGCAGCCGAGGCAAGT 1192
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | | |||||| || || || |||| |||||||| || || ||
Sbjct 1191 CGTCTTGCACATTACAACAAACGGTCAACCATTTCATCGCGTGAGATCCAAACTGCAGTA 1132
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || ||| || |||||||| | |||||| || || || |||||
Sbjct 1131 CGTCTCATTTTGCCAGGTGAACTGGCAAAGCACGCGGTGTCAGAAGGCAC 1082
>seq982
Length=21840
Score = 91.5 bits (100), Expect = 2e-12
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| |||||||||||||| | |||| ||||||| ||||||| ||
Sbjct 11963 ATGTCAATTATGAATTCGTTTGTCAACGATGTCTTCGAGCGCATCGCAGCCGAGGCAAGT 11904
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | | |||||| || || || |||| |||||||| || || ||
Sbjct 11903 CGTCTTGCACATTACAACAAACGGTCAACCATTTCATCGCGTGAGATCCAAACTGCAGTA 11844
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || ||| || |||||||| | |||||| || || || |||||
Sbjct 11843 CGTCTCATTTTGCCAGGTGAACTGGCAAAGCACGCGGTGTCAGAAGGCAC 11794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177253901280036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |