Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq546 118 1e-21 seq59 114 1e-20 seq22 91.5 1e-13 >seq546 Length=41299 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 ||||||||||| | | |||||||| ||||| ||||||||||| || |||||||| | Sbjct 26451 CCTGCAAAAATGAGTCTTTGCTGATCAGGCGGAATGCCTTCTTTGTCCTGAATTTTAGAT 26510 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | || || || | ||| || || ||||| || ||||| ||||||||| Sbjct 26511 TTTACATTTTCGATAGTATCAGATGCTTCTACTTCAAGAGTGATTGTTTTGCCGGTTAAA 26570 Query 134694 GTTTTAACGAAAATTTGCATTTTGTTTT 134721 |||||||| || || ||||||||||||| Sbjct 26571 GTTTTAACAAATATCTGCATTTTGTTTT 26598 >seq59 Length=128137 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||||| || | ||||| ||||| || || |||||||| || ||||| ||||| Sbjct 71872 CCAGCAAATATAAGGCGCTGTTGATCCGGAGGGATGCCTTCCTTGTCTTGGATTTTAGCC 71931 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||| ||||||||||| || || ||||| |||||||| || ||| Sbjct 71932 TTAACATTTTCAATTGTGTCTGACGATTCCACCTCAAGTGTAATTGTTTTACCAGTCAAA 71991 Query 134694 GTTTTAACGAAAATTTGCATTTT 134716 |||||||| ||||||||||| || Sbjct 71992 GTTTTAACAAAAATTTGCATCTT 72014 >seq22 Length=171845 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || |||||||| | ||||||||||| || || || ||||| || ||||| ||||| Sbjct 89794 CCAGCAAAAATTAGGCGCTGCTGATCAGGTGGAATACCTTCCTTATCTTGGATTTTGGCC 89853 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || ||||| || || || ||||| || | Sbjct 89854 TTCACATTTTCGATAGTGTCGGAAGCTTCAACCTCGAGGGTGATAGTCTTACCAGTCAGT 89913 Query 134694 GTTTTAACGAAAATTTGCAT 134713 ||||| |||||||||||||| Sbjct 89914 GTTTTCACGAAAATTTGCAT 89933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505361897600560