Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq885 116 3e-21
seq222 84.2 2e-11
>seq885
Length=25167
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 19615 GTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAAT 19674
|| ||||| || || || || |||||| | | || | || |||||| | || ||||||
Sbjct 22232 GTGCATGATACAGTGGTAAACCAACTCTTAGCTAAGATGGATGGTGTTGAACAGCTGAAT 22173
Query 19675 AATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGA 19734
|| ||| | |||||||| |||||||||||| ||| | || || || || ||||||
Sbjct 22172 AACATTCTTGTTATTGGAATGACTAATAGAAAGGATATGATTGATGAGGCGTTGTTACGA 22113
Query 19735 CCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAA 19794
|| ||||| ||||| | |||| |||||| |||| |||||| | || ||| || |
Sbjct 22112 CCAGGTCGTATGGAAGTGCAGATGGAAATTTCACTACCAGATGAAAGCGGTCGTTTGCAG 22053
Query 19795 ATTTTAAACATACATACATCAACCATGCG 19823
|||||||| || || || || | |||||
Sbjct 22052 ATTTTAAAGATTCACACTTCTAGAATGCG 22024
>seq222
Length=74321
Score = 84.2 bits (92), Expect = 2e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 43897 GGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCA 43956
||| | ||| ||| | |||||||| ||| |||||||||| || | ||| || || |||||
Sbjct 46452 GGTAAATCGCTTTTCTCAAGAAGTCCAAGTACCAGAAGCTCGGTTTTTCTACGGTTTTCA 46393
Query 43957 AATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990
|||| | |||||||||||||| |||||||||
Sbjct 46392 AATTATGGTGGAAAATATTCATTCAGAAATGTAC 46359
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397428011396890
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |