Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24] 5,778 sequences; 75,392,092 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1122 86.0 8e-12 >seq1122 Length=18201 Score = 86.0 bits (94), Expect = 8e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 179939 CTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCA 179998 |||| |||||| | |||||||||||| || || |||||||| || | || ||||||| Sbjct 7583 CTCGAACATTTGTTAACTTCCCACGGATTGGAAATACACCGTATTGTTTCCGTCCAACCA 7524 Query 179999 CAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTAC 180058 ||| ||||| ||||| || || | ||| || ||||| || || || || || | |||| Sbjct 7523 CAGCAAGACCTGCAACAGCAAGCGCCTTTGCAGAATCTCCTTCAGTTACAATCAAAGTAC 7464 Query 180059 ACTTTCCAGATTGTGCCGTCCCTGC 180083 | || | | |||||| ||||| Sbjct 7463 AGTTATGACTATTTGCCGTGCCTGC 7439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618390533517680