Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Thelazia_20callipaeda_20[genbank_20GCA_5F000981425.1_202014-09-24]
5,778 sequences; 75,392,092 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq22 89.7 3e-13
>seq22
Length=171845
Score = 89.7 bits (98), Expect = 3e-13
Identities = 110/145 (76%), Gaps = 4/145 (3%)
Strand=Plus/Plus
Query 34565 TACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTT 34624
|||| ||||| || | |||||||||||| || || | || |||||||| ||| ||||
Sbjct 88547 TACCCGCAAAAATAAGACGCTGTTGGTCAGGGGGAATACCTTCCTTGTCC-TGAATTTTT 88605
Query 34625 GTTTTAACGATAA-AATTGTGTCTTC-GCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
| || || | |||||| ||| ||| || || |||| ||||| ||||| || ||
Sbjct 88606 GCCTTCACATTTTCAATTGTATCTGATGCT-TCAACCTCCAACGTTATAGTTTTGCCAGT 88664
Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707
||||||||||||||||||||||||
Sbjct 88665 CAACGTTTTCACAAAAATCTGCATG 88689
Score = 84.2 bits (92), Expect = 1e-11
Identities = 106/143 (74%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 34565 TACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTT 34624
|||||||||| || | ||||| ||||||||||| | ||| ||||||||| ||| |||
Sbjct 88882 TACCGGCAAAAATAAGTCGCTGCTGGTCCGGCGGAATTCCTTCCTTGTCT-TGAATCTTT 88940
Query 34625 GTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTT 34683
| |||||| | || ||||| ||| ||||||| ||| ||||||||||| ||
Sbjct 88941 GCTTTAACATTTTCGATAGTGTCAGAAGCCTCAACTTCCAAGGTGATCGTTTTACCAGTC 89000
Query 34684 AACGTTTTCACAAAAATCTGCAT 34706
| || || ||||| || |||||
Sbjct 89001 AGAGTCTTTACAAATATTTGCAT 89023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314707436938274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |