Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq334 125 6e-24 >seq334 Length=798041 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || || | ||||| | ||| | || ||||| ||||| ||||| ||||||| | Sbjct 402005 CCCCCGCGAAGACGAAGCACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCGAC 402064 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| |||||||||||||| ||||||||| ||||||||| || Sbjct 402065 AGAGTACGTCCATCCTCAAGCTGTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTGGG 402124 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || ||||| |||||| | ||| |||||| | ||| | Sbjct 402125 ATGCCCTCCTTATCCTGAATCTTCGCTTTCACATTCTCGATAGTATCGGATGCTTCCACT 402184 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||||||||| | ||| || || || |||||||| Sbjct 402185 TCCAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAAGATTTGCAT 402231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422141571386612