Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1429 100 2e-16 seq334 91.5 1e-13 >seq1429 Length=437943 Score = 100 bits (110), Expect = 2e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 |||||||| || | |||||||| ||||| || | ||||||||||||| |||||| | Sbjct 418749 CCGGCGAAAATTAGACGCTGTTGATCGGGTGGGATACCCTCCTTGTCCTGAATTTTGGCC 418690 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 || || | | | ||| |||| ||||| | || || ||||||||||||||| Sbjct 418689 TTTACGTTTTCGATAGTATCCGACGCCTCAACCTCAAGTGTGATGGTCTTGCCCGTCAGA 418630 Query 45317 GTCTTCACAAAGATTTGCATGTTGCCTC 45344 ||||||||||| || |||||| |||||| Sbjct 418629 GTCTTCACAAAAATCTGCATGATGCCTC 418602 >seq334 Length=798041 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 || ||||| |||| |||||||||||| || || | |||||||||||| || ||| | Sbjct 403542 CCAGCGAAGATCAGCCGCTGTTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTTGCC 403601 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 ||||| | | | |||| | |||||||||| | || || || || ||||| ||| Sbjct 403602 TTAACGTTCTCGATCGTGTCAGAAGCCTCCACCTCGAGCGTGATGGTTTTACCCGTAAGA 403661 Query 45317 GTCTTCACAAAGATTTGCATGTTGCCTC 45344 |||||||| ||||| ||||| ||||| Sbjct 403662 GTCTTCACGAAGATCTGCATACCGCCTC 403689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394965144024997