Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_006268.1 Length=75294 Score E Sequences producing significant alignments: (Bits) Value seq284 102 4e-17 >seq284 Length=1021 Score = 102 bits (112), Expect = 4e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 18105 AGAGGATGCACGTTATGTTTTACCAAACGCTGTTAATACAAACATCGTAGTAACTATGAA 18164 ||| |||||| | |||||||| || || ||| | | ||||| || ||| | |||||||| Sbjct 545 AGAAGATGCAAGATATGTTTTTCCTAATGCTTGTGAAACAAAAATTGTATTTACTATGAA 604 Query 18165 TGCTAGGGAATTATATAATTTCTTTTCCCTAAGGCTCTGTTCAAGAGCTCAATGGGAAAT 18224 |||||| ||| |||||||| || || |||| ||||||||||||||||| Sbjct 605 TGCTAGAAGTTTAATGAATTTCTTCCACCATAGATGCTGTGATAGAGCTCAATGGGAAAT 664 Query 18225 TAGAGCAATTGCATGGAGAATGTTAGAGGAAGTAAAGAAAGTTCACCCAAGATTATTTAG 18284 ||| | || ||| | |||| | || ||||| || || ||| |||| |||||||| Sbjct 665 AAGAACTATGGCAGAAAAAATGGTTGATGAAGTTAAAAAGGTTGCACCAATATTATTTAA 724 Query 18285 ATATGCTGGACCAA 18298 |||| || |||| Sbjct 725 GAATGCAGGTCCAA 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240748915962135