Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq334 93.3 4e-14 >seq334 Length=798041 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| ||||| | ||| ||||| | ||| | ||| ||||| ||||| |||||||| || Sbjct 402003 AGCCCCCGCGAAGACGAAGCACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCG 402062 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || || || ||||| ||||| ||||| ||| | || | ||||||||||| || | Sbjct 402063 ACAGAGTACGTCCATCCTCAAGCTGTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTG 402122 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || || || || ||| || | | ||| | |||||||| | || | Sbjct 402123 GGATGCCCTCCTTATCCTGAATCTTCGCTTTCACATTCTCGATAGTATCGGATGCTTCCA 402182 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| || || || ||||| || ||||| Sbjct 402183 CTTCCAGCGTGATCGTCTTGCCGGTAAGCGTCTTAACGAAGATTTGCAT 402231 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||| |||| ||| | || ||||||||||| |||||||||||| | Sbjct 405369 CCACCGCGCAGACGCAGAACTAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCGGAC 405428 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTG 131098 | || ||| || || ||||||||||||| Sbjct 405429 AGCGTACGCCCATCTTCAAGCTGCTTGCCTG 405459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471877940042880