Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq3054 140 2e-28 seq2570 140 2e-28 seq1301 140 2e-28 seq514 140 2e-28 seq446 140 2e-28 seq25 140 2e-28 seq2432 120 2e-22 seq636 120 2e-22 seq2726 116 2e-21 seq94 113 3e-20 seq2784 107 1e-18 seq2390 107 1e-18 seq1231 102 5e-17 seq3101 98.7 7e-16 seq2028 89.7 3e-13 seq1508 89.7 3e-13 seq1120 89.7 3e-13 >seq3054 Length=284887 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 62357 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 62416 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 62417 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 62451 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 64628 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 64687 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 64688 GGCCATATTTAGCCTTA 64704 Score = 98.7 bits (108), Expect = 7e-16 Identities = 71/82 (87%), Gaps = 5/82 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||| ||||||||| |||| |||||||||||||||||| || |||||||| Sbjct 100250 AAGCCCTTTCACTTGGCTGTAGTTTGGCTAGATAGTAGATAGGGGCAGTGGAAATCTCGT 100309 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 100310 TAATCCATTCATGCGCGTCACT 100331 Score = 98.7 bits (108), Expect = 7e-16 Identities = 71/82 (87%), Gaps = 5/82 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||| ||||||||| |||| |||||||||||||||||| || |||||||| Sbjct 101746 AAGCCCTTTCACTTGGCTGTAGTTTGGCTAGATAGTAGATAGGGGCAGTGGAAATCTCGT 101805 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 101806 TAATCCATTCATGCGCGTCACT 101827 >seq2570 Length=98064 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 95589 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 95530 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 95529 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 95495 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 93330 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 93271 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 93270 GGCCATATTTAGCCTTA 93254 >seq1301 Length=170485 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 166353 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 166294 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 166293 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 166259 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 164082 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 164023 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 164022 GGCCATATTTAGCCTTA 164006 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 168877 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 168818 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 168817 GGCCATATTTAGCCTTA 168801 >seq514 Length=193539 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2856 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2797 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2796 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2762 Score = 120 bits (132), Expect = 2e-22 Identities = 78/86 (91%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3395 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 3336 Query 25957 TAATCCTTTCATGCGCGTCACTAATT 25982 |||||| |||||||||||||||| || Sbjct 3335 TAATCCATTCATGCGCGTCACTATTT 3310 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| || | || | Sbjct 487 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCGTTTCGTGGCCT 428 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 427 GGCCATATTTAGCCTTA 411 >seq446 Length=268109 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 751 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 810 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 811 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 845 >seq25 Length=70551 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 3034 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2975 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2974 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2940 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 763 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 704 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 703 GGCCATATTTAGCCTTA 687 >seq2432 Length=376782 Score = 120 bits (132), Expect = 2e-22 Identities = 78/86 (91%), Gaps = 5/86 (6%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5337 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5396 Query 25957 TAATCCTTTCATGCGCGTCACTAATT 25982 |||||| |||||||||||||||| || Sbjct 5397 TAATCCATTCATGCGCGTCACTACTT 5422 >seq636 Length=84763 Score = 120 bits (132), Expect = 2e-22 Identities = 78/86 (91%), Gaps = 5/86 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2288 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2229 Query 25957 TAATCCTTTCATGCGCGTCACTAATT 25982 |||||| |||||||||||||||| || Sbjct 2228 TAATCCATTCATGCGCGTCACTATTT 2203 Score = 116 bits (128), Expect = 2e-21 Identities = 75/82 (91%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4252 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4193 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 4192 TAATCCATTCATGCGCGTCACT 4171 Score = 116 bits (128), Expect = 2e-21 Identities = 75/82 (91%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 4713 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 4654 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 4653 TAATCCATTCATGCGCGTCACT 4632 >seq2726 Length=15153 Score = 116 bits (128), Expect = 2e-21 Identities = 75/82 (91%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 13163 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13104 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 13103 TAATCCATTCATGCGCGTCACT 13082 Score = 114 bits (126), Expect = 9e-21 Identities = 74/81 (91%), Gaps = 5/81 (6%) Strand=Plus/Minus Query 25916 GGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGC 25970 |||||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct 1606 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 1547 Query 25971 GCGTCACTAATTAGATGACGA 25991 ||||||||||||||||||||| Sbjct 1546 GCGTCACTAATTAGATGACGA 1526 >seq94 Length=177966 Score = 113 bits (124), Expect = 3e-20 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 1703 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 1762 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 1763 GGCCATATTTAGCCTTA 1779 Score = 104 bits (114), Expect = 2e-17 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct 3392 CTCTCTCTT-AAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCGT 3450 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 3451 GGCCATATTTAGCCTTA 3467 >seq2784 Length=632769 Score = 107 bits (118), Expect = 1e-18 Identities = 73/82 (89%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||| ||||||||||||||||||||||||||||| |||| || |||||||| Sbjct 275090 AAGCCCGTTTCCTTGGCTGTGGTTTCGCTAGATAGTAGACAGGGACAGTGGGAATCTCGT 275031 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||||||||||| Sbjct 275030 TAATCCATTCATGCGCGTCACT 275009 >seq2390 Length=1158689 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||| || Sbjct 490358 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTTTCAT 490299 Query 20007 GGTAATATTTAGCCTTA 20023 || ||||||||||||| Sbjct 490298 GGCCATATTTAGCCTTA 490282 >seq1231 Length=273543 Score = 102 bits (112), Expect = 5e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || ||||||||||| || || |||||||| ||||| | || || ||||||||| Sbjct 197761 CCCACCAAATATTTCGGTTGTGAGCTTGGCGCGCAGACTAACTTCGACATGAAAAACGAG 197820 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTT 6440 || |||||||| ||||| ||| || | ||||| |||||||| | || ||||| || Sbjct 197821 CGTTTCATCGTGAACGGCGAGCACGACGCCGCCAAATTGCAGGACATCCTCGACGGTTTC 197880 Query 6441 ATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGAC 6484 || || || || ||||| | | |||||| || |||||||| Sbjct 197881 ATCAAAAAATTCGTTCTGTGCCCCGCATGCGAGAATCCGGAGAC 197924 >seq3101 Length=397525 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| ||| Sbjct 359940 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCAAGGTACTTGTCTGCTATCGGTTTCGT 359881 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||||||||||| Sbjct 359880 GACCATATTTAGCCTTA 359864 >seq2028 Length=218794 Score = 89.7 bits (98), Expect = 3e-13 Identities = 69/82 (84%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||| |||||||||||||||||||||| || |||||||| || |||||||| Sbjct 151206 AAGCCCGTTTCCTTGGCTGTGGTTTCGCTAGACAGAAGATAGGGATAGTGGGAATCTCGT 151147 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||| ||||| Sbjct 151146 TAATCCATTCATGCATTTCACT 151125 >seq1508 Length=14854 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 5/79 (6%) Strand=Plus/Plus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 |||||||||||||||| ||||||| |||||||| ||||| || | |||||||||| Sbjct 806 CCGTTCCCTTGGCTGTCATTTCGCTGGATAGTAGGTAGGGACAGTGGGAGTCTCGTTAAT 865 Query 25961 CCTTTCATGCGCGTCACTA 25979 || |||||||||||||||| Sbjct 866 CCATTCATGCGCGTCACTA 884 Score = 89.7 bits (98), Expect = 3e-13 Identities = 67/79 (85%), Gaps = 5/79 (6%) Strand=Plus/Plus Query 25906 CCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAAT 25960 |||||||||||||||| ||||||| |||||||| ||||| || | |||||||||| Sbjct 2431 CCGTTCCCTTGGCTGTCATTTCGCTGGATAGTAGGTAGGGACAGTGGGAGTCTCGTTAAT 2490 Query 25961 CCTTTCATGCGCGTCACTA 25979 || |||||||||||||||| Sbjct 2491 CCATTCATGCGCGTCACTA 2509 >seq1120 Length=238262 Score = 89.7 bits (98), Expect = 3e-13 Identities = 69/82 (84%), Gaps = 5/82 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||| |||| |||||||||||||||||||| |||||||||| || || |||||||| Sbjct 61890 AAGCACGTTTCCTTGGCTGTGGTTTCGCTAAATAGTAGATAAGGATAGTGGGAATCTCGT 61831 Query 25957 TAATCCTTTCATGCGCGTCACT 25978 |||||| ||||||| |||||| Sbjct 61830 TAATCCATTCATGCATGTCACT 61809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334853893863167