Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2286 100 6e-16 seq1342 100 6e-16 seq956 100 6e-16 seq424 100 6e-16 seq2767 98.7 2e-15 >seq2286 Length=448386 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 367878 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 367819 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 367818 CCCCGCATCGGGC 367806 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 142506 CCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCC 142565 || |||||||||||||| || || ||||||||||| ||||| |||| |||||||||||| Sbjct 352426 CCCGTTAGCTCAGTCGGCAGGGCACTAGACTCTTAGTCTAGCTGTCGAGGGTTCGAGCCC 352367 Query 142566 CACATCGGGC 142575 | |||||||| Sbjct 352366 CGCATCGGGC 352357 >seq1342 Length=488809 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 306115 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 306056 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 306055 CCCCGCATCGGGC 306043 >seq956 Length=103417 Score = 100 bits (110), Expect = 6e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 100651 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 100710 Query 142564 CCCACATCGGGCAGA 142578 ||| |||||||| || Sbjct 100711 CCCGCATCGGGCTGA 100725 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 101323 GCCCGGTTAGCTCAGTCGGTAGAGCACAAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 101382 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 101383 CCCGCATCGGGC 101394 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 102668 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 102727 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 102728 CCCGCATCGGGC 102739 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 100875 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 100934 Query 142564 CCCACATCGGGCAGA 142578 ||| |||| ||| || Sbjct 100935 CCCGCATCCGGCTGA 100949 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 102444 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGA 102503 Query 142564 CCCACATCGGGCAGA 142578 ||| |||||||| || Sbjct 102504 CCCGCATCGGGCTGA 102518 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 || |||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 102892 GCTCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 102951 Query 142564 CCCACATCGGGCAGA 142578 ||| |||||||| || Sbjct 102952 CCCGCATCGGGCTGA 102966 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||| |||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 99125 GCCCGGTTAGCTCACTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 99184 Query 142564 CCCACATCGGGCAGA 142578 ||| |||| ||| || Sbjct 99185 CCCGCATCAGGCTGA 99199 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||| Sbjct 99353 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTCGCCGTCGCCGGTTCGAGG 99412 Query 142564 CCCACATCGGGCAGA 142578 ||| |||||||| || Sbjct 99413 CCCGCATCGGGCTGA 99427 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||||||||||||||||||| || | ||||||||||||| | |||| |||||||||| Sbjct 101099 GCCCGGTTAGCTCAGTCGGTAGTGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 101158 Query 142564 CCCACATCGGGCAGA 142578 ||| |||| ||| || Sbjct 101159 CCCGCATCCGGCTGA 101173 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||| ||||||||| | |||| |||||||||| Sbjct 101547 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGATTCTTAATCTGGCTGTCGCGGGTTCGAGC 101606 Query 142564 CCCACATCGG 142573 ||| |||||| Sbjct 101607 CCCGCATCGG 101616 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||| ||||| | |||||| |||||| | |||| |||||||||| Sbjct 101772 GCCCGGTTAGCTCAGTCGGCAGAGCACCAGACTCCTAATCTGGCTGTCGCGGGTTCGAGC 101831 Query 142564 CCCACATCGGGCAGA 142578 |||||||| ||| || Sbjct 101832 CCCACATCCGGCTGA 101846 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | ||| |||||||||| Sbjct 103136 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCCCGGGTTCGAGC 103195 Query 142564 CCCACATCGGGC 142575 | | |||||||| Sbjct 103196 CTCGCATCGGGC 103207 >seq424 Length=428307 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| | ||||||||||||| | |||| ||||||||| Sbjct 311330 AGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 311389 Query 142563 CCCCACATCGGGC 142575 |||| |||||||| Sbjct 311390 CCCCGCATCGGGC 311402 >seq2767 Length=241721 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| | |||| |||||||||| Sbjct 68450 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 68391 Query 142564 CCCACATCGGGC 142575 ||| |||||||| Sbjct 68390 CCCGCATCGGGC 68379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027535792532737