Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_009965.1 Length=24655 Score E Sequences producing significant alignments: (Bits) Value seq284 80.6 4e-11 >seq284 Length=1021 Score = 80.6 bits (88), Expect = 4e-11 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 19400 GGACCAGCATACTTAAAGAGACGTGGGTGTACTCTTTTCA-CTTCTTCTAACATTTTCCA 19458 ||||| |||| |||||| | | | |||| | ||||| | |||| || | |||||| Sbjct 736 GGACCTGCATTCTTAAATA-ATATTGGTGCAACCTTTTTAACTTCATCAACCATTTTTTC 678 Query 19459 TGCAACTGCCCTAATTTCCCATTGTGCTCTTGAACAGAGCCTTAGTCCGAAGAAATT-AT 19517 ||| | | || ||||||||||| ||||| |||| || | ||||||||| || Sbjct 677 TGCCATAGTTCTTATTTCCCATTGAGCTCTATCACAGCATCTATGGTGGAAGAAATTCAT 618 Query 19518 ACAACTCACGGGCATTCATTGTAACGACAATGTTTGTGTTCAC-ACCGTTAGGTAAAATA 19576 |||| | |||||||| |||| ||||| ||||| ||||| | | ||||| |||| | Sbjct 617 TAAACT-TCTAGCATTCATAGTAAATACAATTTTTGT-TTCACAAGCATTAGGAAAAACA 560 Query 19577 TAACGTGCATCTTC 19590 || | ||||||||| Sbjct 559 TATCTTGCATCTTC 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78756780335838