Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq334 129 7e-25 >seq334 Length=798041 Score = 129 bits (142), Expect = 7e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| ||||| | ||| ||| |||||||| |||||||| || ||||| || | Sbjct 402016 ACGAAGCACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCGACAGAGTACGTCC 402075 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||| ||||| ||||| || | ||||||||||| | || | || |||||| Sbjct 402076 ATCCTCAAGCTGTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTT 402135 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| || | || | | || ||| | |||||| |||| |||||| Sbjct 402136 ATCCTGAATCTTCGCTTTCACATTCTCGATAGTATCGGATGCTTCCACTTCCAGCGTGAT 402195 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || ||||| ||||| ||||||||||| Sbjct 402196 CGTCTTGCCGGTAAGCGTCTTAACGAAGATTTGCAT 402231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565076904323640