Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq334 105 7e-18 >seq334 Length=798041 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || ||||| || ||||| | || || || || || Sbjct 402231 ATGCAAATCTTCGTTAAGACGCTTACCGGCAAGACGATCACGCTGGAAGTGGAAGCATCC 402172 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | |||| || || | || || ||||| || || | ||||| Sbjct 402171 GATACTATCGAGAATGTGAAAGCGAAGATTCAGGATAAGGAGGGCATCCCACCAGACCAG 402112 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||||||||||||||| || || | || || || ||||||||| Sbjct 402111 CAGCGACTTATTTTCGCGGGCAAACAGCTTGAGGATGGACGTACTCTGTCGGACTACAAC 402052 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||| || | || || ||| | ||||| ||| Sbjct 402051 ATCCAAAAAGAGTCTACCCTTCATCTTGTGCTTCGT 402016 Score = 86.0 bits (94), Expect = 6e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| ||||||||||| |||| || ||||| | Sbjct 403681 ATGCAGATCTTCGTGAAGACTCTTACGGGTAAAACCATCACGCTCGAGGTGGAGGCTTCT 403622 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| | ||| |||| ||||| ||||| || || | ||||| Sbjct 403621 GACACGATCGAGAACG-TTAAGGCAAAGATCCAGGACAAGGAGGGCATCCCACCTGACCA 403563 Query 38363 ACAGCGGCTCATTTACGCGGG 38383 ||||||||| || | ||| || Sbjct 403562 ACAGCGGCTGATCTTCGCTGG 403542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500029894378880