Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1344 297 2e-75 seq482 150 2e-31 seq2524 125 9e-24 seq11463 104 3e-17 >seq1344 Length=202344 Score = 297 bits (328), Expect = 2e-75 Identities = 820/1234 (66%), Gaps = 35/1234 (3%) Strand=Plus/Minus Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||| | |||||| ||||| | ||||| || || |||| || || | | || Sbjct 96541 GGTCATCACACCACCGGCCGTTTCAATACCAAGTGATAGTGGTGCAACATCGACCAATAG 96482 Query 6985 CAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 | || | |||| || || | | |||| | || || ||||| || | ||| || Sbjct 96481 GACATCCTTTACAGTTTTGTCTTGTACTCCCGAAAGAATTGCCGCTTGAACAGCCGCTCC 96422 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 || ||||| || ||||||||||| |||| | ||||||||||||||| |||||| | || Sbjct 96421 ATAGGCGACTGCTTCATCGGGGTTGATCGAATGATTCAGTTCTTTACCATTAAAAAATTC 96362 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 | |||||||| ||| | ||| || || || || || || || || | || | |||| Sbjct 96361 GGCTAACATTTTTTGCACTTTTGGAATACGAGTTGAACCGCCAACAAGAATAACCTCAT- 96303 Query 7165 CACTTTCGA--TTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 || ||| || ||| || | | || || || | ||| || || ||||| | | Sbjct 96302 CAATTT-GACGTTTCTCCAAATGTGCATCCGTAATCGCTTTCTCTACTGGTTCAAGCGTT 96244 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 ||||| || | ||| || || | ||||||||||||||||| | ||| | || | | Sbjct 96243 TTACGAAAAAGGTCAATGCATAACTCCTCAAAACGTGCACGTGAAATTTTCGAATTCATA 96184 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAAC 7339 || | || || ||||| ||| | ||| || | | | || ||| ||||| Sbjct 96183 TCCATTCCCTCATATAAACTATCGACTTCGATTACCGCCT---CAGTTGAACTCGATAAA 96127 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || || || || || ||||| ||||| || | || | | | | ||| | | || Sbjct 96126 GTACGTTTAGCACGTTCACAAGCCGTACGAAGCCGTCTCAACGATCTAGGGCTTCTTGAT 96067 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAG--AGAAGTGTCGA-AGGAGTCTCGAA 7456 |||||||| ||||||||| || ||||| | || | || | | | ||| Sbjct 96066 ATATCTTTACCGGTTTTACGTTTGAATTCTTCGACAAAAAATTTCACCATGCGA-TCG-- 96010 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| || |||||||| || ||||| || || || | |||||| || || | | Sbjct 96009 TCGAAATCCTCTCCACCCAAATGCGTATCACCGGCCGTTGATTTGACCTCGAATAAAGAG 95950 Query 7517 CCTTCAATGTTTAACAAC---GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573 |||||| | || |||| |||||||| || || ||||| || | ||||| | ||| Sbjct 95949 CCTTCAGCGATTGACAAAATTGAAACATCGAATGTGCCACCGCCTAAATCAAATACGAGC 95890 Query 7574 ACGTTCGTATCGTCGTCTTTGTT-CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 || || |||| || |||| || |||||| ||||| || || | || || || || || Sbjct 95889 ACATTTTTATCCTC-TCTTAATTTCTTATCAAGACCATAGGCAAGTGCAGCAGCAGTAGG 95831 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 |||||||| ||||| || ||| || || |||||||| || |||||||||| ||||||| Sbjct 95830 CTCATTAATGATACGTAACACA-TTGAGCCCAGCAATTGTGCCCGCATCTTTGGTCGCTT 95772 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 ||||||| || || || || ||||| || ||||| || || || | || | | Sbjct 95771 GTCGTTGACTGTCATTGAAATATGCCGGTACGGTTACAACGGCATCTCTTACCGGATGGC 95712 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | | | | | ||| || | |||||||| || | || ||| |||||||||||||| | Sbjct 95711 CAACAAAAGCTTCAGCAGTCTCTTTCATCTTCACCAAAATCATTGATGAAATCTCTTCGG 95652 Query 7812 CCGCAAACTGTTTCG--TTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | ||| |||| |||| || ||||| || |||| || |||||| ||| Sbjct 95651 GAGTAAA--AATTCGTTTTTCGCCTTTAAATTCTACTTGAACGGCCGGTTTA-CCG--TT 95597 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAA 7929 | | || ||| ||| ||||| | |||||| ||||| | || | || || | Sbjct 95596 TTTTGCTACAATCTTGAACGGCCAATGTCGCATATCTTCTTGCA-CTTTCGGATCGTCCA 95538 Query 7930 CTTT-CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 ||| | ||| ||||| || ||||| ||||| || || |||| || || |||| || Sbjct 95537 TTTTCCGTCCAATAAGGCGTTTTGCGTCAAATACCGTATTTTCAGGATTTCTGGCCACTT 95478 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 | | | |||| | ||||| || || || || || || || || || || || | Sbjct 95477 GATCATATGCCGGATTGCCGATTAGCCGCTCGGTA---TCGGTGAATGCCACATATGAAG 95421 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 | || || ||| ||||| ||||| ||||||||||| || | | | ||| | |||| Sbjct 95420 GTGTTGTCTTATTGCCTTGATCGTTGGCAATAATTTCCACTTTGCCATATTGAAATACGC 95361 Query 8109 CGACGCACGAATACGTTGTTCCTAAATCAATACC 8142 | || || ||||| || |||| ||||| || Sbjct 95360 CAACACAACTGTACGTCGTGCCTAGGTCAATTCC 95327 >seq482 Length=218503 Score = 150 bits (166), Expect = 2e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 |||||||| | || ||||||||||| || |||||||||||||| || ||||| | | Sbjct 68506 TTCTTATCCAATCCATACGCGATAGCTGCGGCCGTTGGTTCATTGATGATACGGACTACG 68447 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || || || || || || |||||||||| ||||| ||||| || | |||||| |||||| Sbjct 68446 TTGAGACCGGCGATCGTGCCCGCATCTTTGGTCGCCTGTCGCTGGGCATCGTTGAAGTAG 68387 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || || ||||| | | | || | ||| || ||||||||||| ||||| || Sbjct 68386 GCGGGCACAGTGACCACCGCATGCTTCACCTCCTTGCCAAGATACGATTCAGCGATCTCC 68327 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 ||||| || | ||||||| ||| || || || | || ||| ||||| || Sbjct 68326 TTCATCTTACCCAACACCATCGCTGATATTTCCTCGGGGGCGAACGTCTTCGTATC 68271 Score = 86.0 bits (94), Expect = 8e-12 Identities = 152/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 7880 ACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCG 7939 ||||| | | |||| |||||||||| ||||| ||| || || | | | ||| Sbjct 67635 ACCTTGAAAGGCCAAACTTTCATATCTTCTTGAACCGTTTTATCGTTGTAGTCACGACCG 67576 Query 7940 ATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCC 7999 || || || || || ||||| || || || | ||| || || | |||||||| ||| Sbjct 67575 ATGAGTCGTTTAGCGTCAAAGACCGTATTCTCGGGATTAATCGTAAGCTGGTTCTTGGCC 67516 Query 8000 GCGTCCCCGATAAGACGTT---CATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || ||||||||||||| || ||| |||| ||||| || ||||| || || | Sbjct 67515 GCATCTCCGATAAGACGTTCACCAGTATCACCCGTGAACGCCACATACGAAGGCGTGATA 67456 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTT 8097 || || || || ||||| || || || || || || |||| Sbjct 67455 CGGTTGCCCTGATCGTTTGCGATTATCTCGACACGACCGTT 67415 >seq2524 Length=117457 Score = 125 bits (138), Expect = 9e-24 Identities = 114/141 (81%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 || || || | |||||| |||||||| || || || |||||||| ||||||||||| ||| Sbjct 93326 TTTTTGTCCAAACCGTATGCGATAGCAGCAGCGGTCGGTTCATTGATAATACGAAGCACA 93267 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||||| |||||||| | |||||||||| || ||||| |||||||| ||||||||||| Sbjct 93266 -TTCAGACCAGCAATTGCACCCGCATCTTTGGTGGCTTGACGTTGCGAGTCGTTAAAGTA 93208 Query 7714 GGCCGGGACCGTTACGACCGC 7734 || || || || || ||||| Sbjct 93207 TGCTGGTACAGTAACAACCGC 93187 Score = 104 bits (114), Expect = 3e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||||||||| || | || || |||||||| || || |||| || | || || Sbjct 79354 CCTCATCGGGGTTGATGCTCTTGTTGAGTTCTTTGCCCGAGAAGAAATCGGAGAGCAGTT 79295 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || | ||| || || || || ||||||||||||| ||| || || | || | ||||| Sbjct 79294 TCTGGACTTTGGGAATACGGGTAGATCCACCGACCAGAACAATGTCGTGCATCTGCGATT 79235 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAG 7234 | || ||||| | || || || | || || || || ||||| | | | ||||| | Sbjct 79234 TGTCCATCTTCGCATCACGGAGAGCCTTCTCAACGGGGTCCAT-CGTCGATCGGAATAGA 79176 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 || |||| ||||| ||||| ||||| || ||| || |||||||| | || ||| Sbjct 79175 TCGGCGCACAACTCCTCGAAACGGGCACGAGTGATGTTCGTGTAGAAATCTATTCCCTCG 79116 Query 7295 TATAACGAATCAATTTCAATG 7315 | | ||||| || |||||| Sbjct 79115 AACAGGGAATCGATCTCAATG 79095 Score = 104 bits (114), Expect = 3e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||||||||| || | || || |||||||| || || |||| || | || || Sbjct 81511 CCTCATCGGGGTTGATGCTCTTGTTGAGTTCTTTGCCCGAGAAGAAATCGGAGAGCAGTT 81452 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || | ||| || || || || ||||||||||||| ||| || || | || | ||||| Sbjct 81451 TCTGGACTTTGGGAATACGGGTAGATCCACCGACCAGAACAATGTCGTGCATCTGCGATT 81392 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAG 7234 | || ||||| | || || || | || || || || ||||| | | | ||||| | Sbjct 81391 TGTCCATCTTCGCATCACGGAGAGCCTTCTCAACGGGGTCCAT-CGTCGATCGGAATAGA 81333 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 || |||| ||||| ||||| ||||| || ||| || |||||||| | || ||| Sbjct 81332 TCGGCGCACAACTCCTCGAAACGGGCACGAGTGATGTTCGTGTAGAAATCTATTCCCTCG 81273 Query 7295 TATAACGAATCAATTTCAATG 7315 | | ||||| || |||||| Sbjct 81272 AACAGGGAATCGATCTCAATG 81252 Score = 100 bits (110), Expect = 4e-16 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 7058 TCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGT 7117 ||||| || ||||| | || || ||||| ||| ||| | ||||| | | || Sbjct 96721 TCATCAGGATTAATACTCTTGTTGAGTTCACGTCCGGAGAAAAAGTCCGAAAGGAGTTTC 96662 Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 || | || || || || || || |||||||||| |||||| |||| ||||| || ||| Sbjct 96661 TGCACCTTTGGAATACGAGTTGAACCACCGACCAGAACGATCTCATGCACTTGTGACTTA 96602 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 || ||||| | || ||||| | || || ||||| ||||| ||||| | || Sbjct 96601 TCCATCTTCGCATCACGAAGAGACTTCTCAACAGGGTCCATTGTCGATCGGAATAGATCG 96542 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 || | ||||| ||||| |||||||| || ||||||||||| | || ||| || Sbjct 96541 GCGCATAACTCCTCGAAACGAGCACGGGTGATATTCGTATAGAAATCTATTCCCTCGAAT 96482 Query 7298 AACGAATCAATTTCAATG 7315 | ||||| || |||||| Sbjct 96481 AGGGAATCGATCTCAATG 96464 Score = 93.3 bits (102), Expect = 5e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 |||||||||||||| || ||||||||||| || || || || || || ||||| || ||| Sbjct 67447 TTCTTATCGAGACCATAAGCGATAGCCGCGGCTGTGGGCTCGTTGATGATACGCAGCACA 67388 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| || | || | | |||||||| || || || || || |||||||| ||||| Sbjct 67387 -TTCATACCGGAGATTGCCCCAGCATCTTTGGTTGCCTGACGCTGAGAATCGTTGAAGTA 67329 Query 7714 GGCCGGGACCGTTACGACCGCGTCC 7738 || || || || || ||||| ||| Sbjct 67328 TGCTGGCACGGTGACTACCGCATCC 67304 Score = 93.3 bits (102), Expect = 5e-14 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG-ACA 7653 || ||||||||||| || ||||||||||| || || || || || || ||||| || ||| Sbjct 77774 TTTTTATCGAGACCATAAGCGATAGCCGCGGCTGTGGGCTCGTTGATGATACGCAGCACA 77715 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| || | || | | |||||||| ||||| || || || |||||||| ||||| Sbjct 77714 -TTCATACCGGAGATTGCACCAGCATCTTTGGTCGCCTGACGCTGGGAATCGTTGAAGTA 77656 Query 7714 GGCCGGGACCGTTACGACCGCGTCC 7738 || || || || || ||||| ||| Sbjct 77655 TGCTGGCACGGTGACTACCGCATCC 77631 >seq11463 Length=274 Score = 104 bits (114), Expect = 3e-17 Identities = 181/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 7056 CCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTT 7115 ||||||||||||| || | || || |||||||| || || |||| || | || || Sbjct 3 CCTCATCGGGGTTGATGCTCTTGTTGAGTTCTTTGCCCGAGAAGAAATCGGAGAGCAGTT 62 Query 7116 GTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATT 7175 || | ||| || || || || ||||||||||||| ||| || || | || | ||||| Sbjct 63 TCTGGACTTTGGGAATACGGGTAGATCCACCGACCAGAACAATGTCGTGCATCTGCGATT 122 Query 7176 TATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAG 7234 | || ||||| | || || || | || || || || ||||| | | | ||||| | Sbjct 123 TGTCCATCTTCGCATCACGGAGAGCCTTCTCAACGGGGTCCAT-CGTCGATCGGAATAGA 181 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 || |||| ||||| ||||| ||||| || ||| || |||||||| | || ||| Sbjct 182 TCGGCGCACAACTCCTCGAAACGGGCACGAGTGATGTTCGTGTAGAAATCTATTCCCTCG 241 Query 7295 TATAACGAATCAATTTCAATG 7315 | | ||||| || |||||| Sbjct 242 AACAGGGAATCGATCTCAATG 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634951334619880