Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq333 84.2 2e-11 >seq333 Length=310902 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||||||||| || || || ||||| ||||||| || | |||||||||||| ||||| Sbjct 40205 CTTACCGGCGAAGATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTGTCTTGGATCTT 40146 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| || | | | |||||||| ||||| || | || ||||| ||||| || Sbjct 40145 GGTTTTCACGTTCTCGATGGTGTCTGACGCTTCCACTTCAAGAGTGATCGTCTTTCCTGT 40086 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | |||||||| ||||||||||| Sbjct 40085 TAGTGTTTTTACGAAAATCTGCAT 40062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380831482331811