Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_020077.1 Length=76107 Score E Sequences producing significant alignments: (Bits) Value seq284 105 3e-18 >seq284 Length=1021 Score = 105 bits (116), Expect = 3e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 13893 AGAGGATGCACGTTATGTTTTACCAAACGCTGTTAATACAAACATCGTAGTAACTATGAA 13952 ||| |||||| | |||||||| || || ||| | | ||||| || ||| | |||||||| Sbjct 545 AGAAGATGCAAGATATGTTTTTCCTAATGCTTGTGAAACAAAAATTGTATTTACTATGAA 604 Query 13953 TGCTAGGGAATTATATAATTTCTTTTCCCTAAGGCTCTGTTCAAGAGCTCAATGGGAAAT 14012 |||||| ||| |||||||| || || |||| ||||||||||||||||| Sbjct 605 TGCTAGAAGTTTAATGAATTTCTTCCACCATAGATGCTGTGATAGAGCTCAATGGGAAAT 664 Query 14013 TAGAGCAATTGCATGGAGAATGCTAGAGGAAGTAAAGAAAGTTCACCCAAGATTATTTAG 14072 ||| | || ||| | |||| | || ||||| || || ||| |||| |||||||| Sbjct 665 AAGAACTATGGCAGAAAAAATGGTTGATGAAGTTAAAAAGGTTGCACCAATATTATTTAA 724 Query 14073 ATATGCTGGGCCAAATTG 14090 |||| || |||| ||| Sbjct 725 GAATGCAGGTCCAAGTTG 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243349791235236