Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq334 86.0 5e-12 seq1879 82.4 6e-11 >seq334 Length=798041 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 29665 TGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTG 29724 |||||||| || ||||||||||| ||||| |||| ||| || || | || | ||| Sbjct 405863 TGCTGATCTGGTGGAATACCCTCCTTGTCCTGTATTTTCGCCTTAACGTTCTCGATTGTG 405922 Query 29725 TCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGC 29784 || ||| || |||||||| || || ||||| ||||| || || ||||| || |||||| Sbjct 405923 TCCGAAGCCTCCACTTCAAGTGTGATGGTTTTACCAGTCAACGTCTTAACGAAAATCTGC 405982 Query 29785 AT 29786 || Sbjct 405983 AT 405984 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 ||||| | || | || ||| || || || ||||| |||||||||||||| | ||| Sbjct 404257 CCAGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCCTCTTTGTCTTGGATTTTCGCC 404316 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 ||||| | || | ||||| || || || |||||||| || || ||||||||||| Sbjct 404317 TTGACGTTCTCAATTGTGTCTGATGCCTCCACCTCAAGAGTAATCGTCTTGCCAGTTAAC 404376 Query 29767 GTTTTAACAAATATCTGCAT 29786 || || || || |||||||| Sbjct 404377 GTCTTGACGAAGATCTGCAT 404396 >seq1879 Length=657420 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 || ||| | ||||| | |||||| || || ||||| ||||||||||| |||| ||| Sbjct 526475 CCGGCAAAGATCAAGCGTTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGTATTTTAGCC 526534 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 || ||| |||| | || || || || || || || ||||| || || || |||| | Sbjct 526535 TTCACATTTTCAATCGTATCCGAGGCCTCCACCTCGAGGGTTATCGTCTTACCCGTTAGG 526594 Query 29767 GTTTTAACAAATATCTGCATTTT 29789 ||||| || || |||||||| || Sbjct 526595 GTTTTGACGAAAATCTGCATCTT 526617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385111889607837