Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_023573.1 Length=142094 Score E Sequences producing significant alignments: (Bits) Value seq3162 556 1e-153 >seq3162 Length=12458 Score = 556 bits (616), Expect = 1e-153 Identities = 806/1128 (71%), Gaps = 15/1128 (1%) Strand=Plus/Plus Query 62954 GGAACAGCAAGGTTTATCTATAATTGGGTTTTAGGAAAACAAAAAGAAAATTATAAGAAA 63013 ||||| ||||||||||| ||||||||| | ||||||| ||||||||||| | || Sbjct 5061 GGAACTGCAAGGTTTATATATAATTGGACACTTTCAAAACAAGAAGAAAATTATGAAAAT 5120 Query 63014 GGTAATAAGTTTATATCTGATTCTGTACTAAGAAAAGAAATTACTCAACTAAAGAAAACT 63073 ||| || ||||||| |||| | | ||||| ||| | || | |||||||||| | Sbjct 5121 GGTGGAAAATTTATATATGATGGAATTTTGAGAAAGGAATTAACCAAGCTAAAGAAAAAT 5180 Query 63074 GAAGAATTTAATTGGTTAAATGAAGTAAGTAACAATGTACCTAAACAAGCAATTAAAGAT 63133 ||| || |||||||||||||||||| ||| ||||| |||||||||| | |||||| Sbjct 5181 GAA---TTAAATTGGTTAAATGAAGTATCTAATAATGTTGCTAAACAAGCTGTAAAAGAT 5237 Query 63134 GCTTGTAATTCTTACAAAAGGTTTTTTAAAGGACAAGCTAAATTTCCTAAGT-TTAAATc 63192 ||||||||| |||| ||||| || || || ||| | | | || | | | |||| Sbjct 5238 GCTTGTAATGCTTATAAAAGATTCTTCAATGGATTATC-AGATAAACCACGACTTAAGAG 5296 Query 63193 taaaaagaaaactaaacctagtttctacaatgatacacaaaaattaaaggtaaaagaaaa 63252 || ||| || | |||| ||||| ||||||| ||| ||||| || |||||||| Sbjct 5297 TAGAAAAAAGAGTAAAAAATCCTTCTATAATGATAATGTAAAGTTAAAAGTTAAAGAAAA 5356 Query 63253 aCTAGTA-TTACTA--GAAAAAGTAGGATGGGTTAGGACTTCTGAACAATTACCTATAGA 63309 | || ||| || ||||| || || ||| | | ||| ||||||| ||||||| | Sbjct 5357 TAGATTAGTTAATATTGAAAAGGTTGGTTGGATAAAAACTAATGAACAACTACCTATTGG 5416 Query 63310 TACAAAATATTATAATCCAAGAATTACATTTGATGGTAAGTATTGGTATCTAAGTGTTTC 63369 || ||| |||||| | || ||| |||| |||||||||||| | || Sbjct 5417 AGTTAAGTATAGTAATCCTCGTATATCATATGATAACAAGTATTGGTATATCTCGGTAGG 5476 Query 63370 CATAGAAGAAGAAAATAAATATGAAAAATTAACAGAAGAATCTTTAGGAATTGACTTAGG 63429 |||||| ||||| | | | ||| | |||||||| | ||| |||||||| |||||||| Sbjct 5477 TATAGAAAAAGAACAAATTAAAGAAGATTTAACAGATGTATCATTAGGAATAGACTTAGG 5536 Query 63430 AATAAAAGAATTAGCTATATGTTCAGATGGAACCATTTATGGTAATATTAATaaaacagt 63489 | | ||| ||||| ||||| || ||||| || | | | | ||||| |||||| ||| Sbjct 5537 ATTGAAAATTTTAGCAATATGCTCTGATGGTACAGTATTTAGAAATATAAATAAA--AGT 5594 Query 63490 aa--aagttaaaaagttagaaaaaaGATTACGTAGATTGCAACGTAAGGTATCTCGTAAA 63547 | ||||| || | ||||| |||||| ||| | ||| | | || | | ||| Sbjct 5595 TATGTAGTTAGGAAAATTGAAAAGAGATTAAAAAGACTACAAAGACAAGTGAGTAGAAAA 5654 Query 63548 TACCAAAACAATAAAGAAGGGAGTACGTTTGTCAAAACTTGTAATATTATAAAACTTGAA 63607 || |||| |||||| |||| | || |||||||||| ||||| |||||||||||| Sbjct 5655 TATGAAAAAAATAAAAAAGGAAAGGAGTATGTCAAAACTAAAAATATAATAAAACTTGAA 5714 Query 63608 AAACAAATTAAACTCCTACAACGAAGATTGTCTAATATCCGTAAAAATCATTTACATCAA 63667 || || ||| | || |||||||| |||| || | || || || | ||| || Sbjct 5715 AAGTGTATACAACAAATCCATAGAAGATTGGCTAACATTAGAAATAACTATCTTCATGAA 5774 Query 63668 ACAACAACTTCTATCGTGAAAACCAAACCTAGAAGAATTGTTATAGAAGATTTGAATGTA 63727 | ||||| ||| ||||||||||| || ||| |||| ||||||||||| ||||| Sbjct 5775 AGTACAACAAGTATAGTGAAAACCAAGCCATACAGAGTTGTAATAGAAGATTTAAATGTT 5834 Query 63728 AGTGGTATGATGAAAAATAGACATTTAGCTAAAGCAATACAAAAACAAGGTTTCTATGAA 63787 | || ||||||||||||| ||||||| || | || ||| |||||||||||| |||||| Sbjct 5835 AAAGGAATGATGAAAAATAAACATTTATCTGATGCCATAAGAAAACAAGGTTTTTATGAA 5894 Query 63788 TTTAGAAGACAATTAGAATATAAGTGTAAAAGAAAAGGTATTGAATTAGTTATAGTAAAT 63847 |||| ||||||| | |||||||||||||| | ||| ||||| ||||| ||| | || Sbjct 5895 TTTAAAAGACAACTTCAATATAAGTGTAAATTTAGAGGAATTGAGTTAGTAGTAGCAGAT 5954 Query 63848 AGATTCTTTCCTTCTAGTAAAACATGTTCTAGTTGTGGAATTATTAATAAAAACTTAAAA 63907 ||||| | ||| || || || ||| | ||||||| |||| ||| | |||||| Sbjct 5955 AGATTTTATCCATCATCAAAGACTTGTAGTCAATGTGGAAAGGTTAAAAAAGATTTAAAA 6014 Query 63908 CTTTCAGATAGAGTATTTAACTGTGAGTGTGGATTTAGTATTGATAGAGACTTTAATGCT 63967 ||| ||||||||| | ||| ||| |||||| ||| |||||||||||| || || || Sbjct 6015 CTTAAAGATAGAGTTTATAAATGTAGCTGTGGACTTAATATTGATAGAGATTTAAACGCA 6074 Query 63968 AGTGTTAATTTAGCTAATTATAATATT--TAGACTATCACTAACAAGATACTAAGTATAT 64025 ||| ||||| | | || ||||| ||| | | ||||||||| |||||| | |||| Sbjct 6075 AGTATTAATCTTTCAAAATATAA-ATTAGCATAATATCACTAAGAAGATAATGCTGATAT 6133 Query 64026 GTACCATTCGTTGTATGGGAATTTAAGCCTTCGGAGTATTATAGCAAA 64073 ||| || |||||||| ||||||| ||| |||||| ||||| |||| Sbjct 6134 GTAGGATGCGTTGTATCCGAATTTACGCCCTCGGAGAGTTATACCAAA 6181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454442922868880