Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq334 105 6e-18 >seq334 Length=798041 Score = 105 bits (116), Expect = 6e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 133518 TTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTT 133577 || || ||| | ||||| |||||||| || || ||||||||||||||||| ||| || Sbjct 402828 TTACCTGCGAAGATGAGACGCTGCTGATCTGGCGGGATGCCTTCCTTGTCCTGGATTTTA 402887 Query 133578 TGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTC 133637 ||| | | ||||| ||||||| | |||||| |||| |||| || ||||||||| Sbjct 402888 GCCTTAACGTTCTCAATGGTGTCGGACGCCTCCACTTCGAGAGTGATAGTCTTGCCGGTC 402947 Query 133638 AGAGTTTTTACGAAAATCTGCAT 133660 | ||||| ||||| |||||||| Sbjct 402948 AACGTTTTCACGAAGATCTGCAT 402970 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| |||||||| || || ||||| || || || | | | ||||| |||| Sbjct 402028 ATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCGACAGAGTACGTCCA-TCCTCAAGCT 402086 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | ||||||||| |||| || ||||||||||| || |||||||| ||||| || |||| Sbjct 402087 GTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTATCCTGAATCT 402146 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | || | | ||| | || |||| | ||||| || | |||| || ||||||| Sbjct 402147 TCGCTTTCACATTCTCGATAGTATCGGATGCTTCCACTTCCAGCGTGATCGTCTTGCCGG 402206 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| || ||||| Sbjct 402207 TAAGCGTCTTAACGAAGATTTGCAT 402231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483282680634680