Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq334 87.8 2e-12 >seq334 Length=798041 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 35596 ACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG 35655 ||| || || |||| |||||| ||||| | || | || |||||||||| ||||||| Sbjct 403541 ACCAGCGAAGATCAGCCGCTGTTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTTGC 403600 Query 35656 CTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAA 35715 ||| | | | | |||||| | |||||||| | |||||| ||||||||||| | Sbjct 403601 CTTAACGTTCTCGATCGTGTCAGAAGCCTCCACCTCGAGCGTGATGGTTTTACCCGTAAG 403660 Query 35716 AGTTTTCACAAATATCTGCAT 35736 ||| ||||| || |||||||| Sbjct 403661 AGTCTTCACGAAGATCTGCAT 403681 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||| | ||| | ||| ||| ||||| |||||||| || | || || || | || || Sbjct 402022 CACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTC 402081 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||| || ||||| || || | ||||||||||| | || | || |||||| ||| Sbjct 402082 AAGCTGTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTGGGATGCCCTCCTTATCCTG 402141 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 ||||| |||| | | | | || ||| | |||||| |||| ||||||||| || Sbjct 402142 AATCTTCGCTTTCACATTCTCGATAGTATCGGATGCTTCCACTTCCAGCGTGATCGTCTT 402201 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || || ||||| Sbjct 402202 GCCGGTAAGCGTCTTAACGAAGATTTGCAT 402231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450664802633560