Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq334 116 3e-21 >seq334 Length=798041 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||| | ||| || || ||||||||| || || || || | || || ||| | || || Sbjct 402022 CACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCCGACAGAGTACGTCCATCCTC 402081 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193 ||||||||||||||| || ||||| ||||||||||| |||||| | || ||| || ||| Sbjct 402082 AAGCTGTTTGCCCGCGAAAATAAGTCGCTGCTGGTCTGGTGGG-ATGCCCTCCTTATCCT 402140 Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 || ||| ||| | || | | |||||| | ||||| |||| |||||| | | Sbjct 402141 GAATCTTCGCTTTCACATTCTCGATAGTATCGGATGCTTCCACTTCCAGCGTGATCGTCT 402200 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || ||||| ||||| ||||||||||| Sbjct 402201 TGCCGGTAAGCGTCTTAACGAAGATTTGCAT 402231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429425941616441