Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Toxocara_20canis_20[genbank_20GCA_5F000803305.1_202014-12-18] 22,857 sequences; 317,115,901 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq334 89.7 5e-13 >seq334 Length=798041 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 41723 CCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGC 41782 || ||||| ||||| ||||||||||| | || | || |||||||||| ||| ||| | Sbjct 403542 CCAGCGAAGATCAGCCGCTGTTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATCTTTGCC 403601 Query 41783 TTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAG 41841 || |||| | | ||||| | ||||||||| | ||| || ||||||||||| || Sbjct 403602 TT-AACGTTCTCGATCGTGTCAGAAGCCTCCACCTCGAGCGTGATGGTTTTACCCGTAAG 403660 Query 41842 CGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| |||||||| Sbjct 403661 AGTCTTCACGAAGATCTGCAT 403681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462171913968400