Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20britovi_20[genbank_20GCA_5F001447585.1_202015-11-24]
7,991 sequences; 51,504,795 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq67 82.4 7e-11
>seq67
Length=189510
Score = 82.4 bits (90), Expect = 7e-11
Identities = 159/235 (68%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 133008 TTTCGTATAATCGCTCAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGACACTCGTCAG 133067
||||||||||| ||||| || ||||| | | || ||| || ||||| || | ||
Sbjct 40030 TTTCGTATAATTTTTCAAACTCATCGCCCCACAAATCCGCCAATCCAGGACATTCATGAG 39971
Query 133068 GACACATCAATGACCATTTTTCTCCTGCGCTCACCCTTTTCATGAACAACGAAGGTGTCC 133127
| ||||||| |||||| | | | | || | | |||||||| | |||| |||
Sbjct 39970 GGCACATCAGTGACCAATCTCCGTCGGCTTCAATGCGCTTCATGAATAGATCAGGTATCC 39911
Query 133128 ACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCCGCGCCCATATTTCGTTTCAAGT 133187
| | |||| |||| ||||| || || | ||||| |||| | || |||| ||
Sbjct 39910 AGAGGGCATAAAACAAATCTCGGGCTCGGTTTTCTTCGACGCCTGTGTTCTTTTTCGCGT 39851
Query 133188 CCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCAAAGCGCC 133242
| | |||| ||| |||||||| |||||||| || | ||| || || || || ||
Sbjct 39850 CAAGAAAATCAAATATGTCTGCGTGCCAAGGTTCCAAATAGACCGCAAACGCCCC 39796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429894128398605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |