Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20britovi_20[genbank_20GCA_5F001447585.1_202015-11-24] 7,991 sequences; 51,504,795 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1209 96.9 3e-15 seq50 96.9 3e-15 seq1723 95.1 1e-14 seq351 95.1 1e-14 seq542 93.3 4e-14 seq286 93.3 4e-14 seq3254 84.2 2e-11 >seq1209 Length=1128 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 45208 ATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG 45267 |||||||||||||||| || || ||||||||||| |||||||||||||| ||| | Sbjct 312 ATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTTTTTACAT 253 Query 45268 CTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTA 45327 ||| | || || || | ||| ||||| | || | ||||| || |||| ||||| | Sbjct 252 TTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAATGTTTTCA 193 Query 45328 CAAAAATTTGCATCGCGCGAC 45348 ||||||| ||||| ||| || Sbjct 192 CAAAAATCTGCATACCGCCAC 172 >seq50 Length=223599 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45208 ATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG 45267 |||||||||||||||| || || ||||||||||| |||||||||||||| ||| | Sbjct 817 ATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTTTTTACAT 876 Query 45268 CTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTA 45327 ||| | || || || | ||| ||||| | || | ||||| || |||| ||||| | Sbjct 877 TTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAATGTTTTCA 936 Query 45328 CAAAAATTTGCATCGCGCGAC 45348 ||||||| ||||| ||| || Sbjct 937 CAAAAATCTGCATTCCGCCAC 957 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45208 ATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG 45267 |||||||||||||||| || || ||||||||||| |||||||||||||| ||| | Sbjct 1103 ATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTTTTCACAT 1162 Query 45268 CTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTA 45327 ||| | || || || | ||| ||||| | || | ||||| || |||| ||||| | Sbjct 1163 TTTCAATTGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAATGTTTTCA 1222 Query 45328 CAAAAATTTGCATCGCGCGAC 45348 ||||||| ||||| ||| || Sbjct 1223 CAAAAATCTGCATTCCGCCAC 1243 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45208 ATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG 45267 |||||||||||||||| || || ||||||||||| |||||||||||||| ||| | Sbjct 1388 ATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTTTTCACAT 1447 Query 45268 CTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTA 45327 ||| | || || || | ||| ||||| | || | ||||| || |||| ||||| | Sbjct 1448 TTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAATGTTTTCA 1507 Query 45328 CAAAAATTTGCATCGCGCGAC 45348 ||||||| ||||| ||| || Sbjct 1508 CAAAAATCTGCATACCGCCAC 1528 Score = 93.3 bits (102), Expect = 4e-14 Identities = 106/142 (75%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 45208 ATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCG 45267 |||||||||||||||| || || ||||||||||| |||||||||||||| ||| | Sbjct 1674 ATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTTTTCACAT 1733 Query 45268 CTTCTA-CGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTT 45326 ||| | || || || | ||| ||||| | || | ||||| || |||| ||||| Sbjct 1734 TTTCAATNNGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAATGTTTTC 1793 Query 45327 ACAAAAATTTGCATCGCGCGAC 45348 |||||||| ||||| ||| || Sbjct 1794 ACAAAAATCTGCATACCGCCAC 1815 >seq1723 Length=770 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| || || || ||||||| || || || ||||| ||||| || ||||||||||| Sbjct 370 CAATTACTTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 311 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 310 AATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTT 251 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| || |||||||||||||| Sbjct 250 TCCAGTAAGAGTCTTAACAAAAATTTGCAT 221 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || || || || | ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 651 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGAGGAATTCCCTCTTTATCTTGA 592 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 591 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 532 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||||||||| Sbjct 531 CCAGTAAGGGTCTTAACGAAAATTTGCAT 503 >seq351 Length=21764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| || || || ||||||| || || || ||||| ||||| || ||||||||||| Sbjct 20608 CAATTACTTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 20549 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 20548 AATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTT 20489 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| || |||||||||||||| Sbjct 20488 TCCAGTAAGAGTCTTAACAAAAATTTGCAT 20459 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| || || || | ||||| |||||||| ||||| ||||| ||||| ||||| || Sbjct 21456 CAATTACTTACCAGCAAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTG 21397 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||| ||| | |||| || || || | || ||||| | || | |||||| Sbjct 21396 TATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTT 21337 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| ||||| || |||||||||||||| Sbjct 21336 GCCGGTAAGAGTCTTAACAAAAATTTGCAT 21307 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| || ||||||||||||||||| ||| | Sbjct 20871 ATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCTTTTACATTC 20812 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||||||||| || || Sbjct 20811 TCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTAGAGTCTTAACG 20752 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 20751 AAAATTTGCAT 20741 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || || || || | ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 20044 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGAGGAATTCCCTCTTTATCTTGA 19985 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 19984 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 19925 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||||||||| Sbjct 19924 CCAGTAAGGGTCTTAACGAAAATTTGCAT 19896 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || || || || | ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct 21737 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGAGGAATTCCCTCTTTATCTTGT 21678 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 21677 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 21618 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || |||||||||||||| Sbjct 21617 CCAGTAAGGGTCTTAACAAAAATTTGCAT 21589 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| |||||||| ||||| ||||| ||||| ||||| || ||||| ||| | | Sbjct 20305 ATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTCCCTTTCACATTT 20246 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | ||||||||||| ||||| || || Sbjct 20245 TCTATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCGGTGAGAGTCTTAACG 20186 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 20185 AAAATTTGCAT 20175 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| ||||| ||||| || ||||| ||| | Sbjct 21154 ATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTCCCTTTTACATTC 21095 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||| ||||| || ||| Sbjct 21094 TCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACA 21035 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 21034 AAAATTTGCAT 21024 >seq542 Length=5403 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| || ||||||||||||||||| ||| | Sbjct 349 ATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCTTTTACATTC 290 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||||||||| || || Sbjct 289 TCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTAGAGTCTTAACG 230 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 229 AAAATTTGCAT 219 >seq286 Length=43880 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| || ||||||||||||||||| ||| | Sbjct 349 ATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCTTTTACATTC 290 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||||||||| || || Sbjct 289 TCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTAGAGTCTTAACG 230 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 229 AAAATTTGCAT 219 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || || || || | ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 25148 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 25089 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 25088 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 25029 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || |||||||||||||| Sbjct 25028 CCAGTAAGGGTCTTAACAAAAATTTGCAT 25000 Score = 91.5 bits (100), Expect = 1e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 ||||| || || || | ||||| ||||| || ||||| ||||| ||||| ||||| || Sbjct 24867 CAATTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 24808 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 ||||| ||| | |||| || || || | || ||||| | || | |||||| Sbjct 24807 TATTTTCCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTT 24748 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||| ||||| || |||||||||||||| Sbjct 24747 GCCGGTAAGAGTCTTAACAAAAATTTGCAT 24718 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || || || || | ||||| ||||| || ||||| ||||| || |||||||||||| Sbjct 24017 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 23958 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 |||||| ||| | ||||| || || || | || ||||| | ||| | ||||| Sbjct 23957 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 23898 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||||||||| Sbjct 23897 CCAGTAAGGGTCTTAACGAAAATTTGCAT 23869 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| ||||| ||||| || ||||| ||| | Sbjct 24278 ATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCTTTTACATTC 24219 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||| ||||| || ||| Sbjct 24218 TCTATTGTATCAGATGGTTCAACTTCCAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACA 24159 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 24158 AAAATTTGCAT 24148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 |||| |||||||| || || ||||| ||||| ||||| || ||||| ||| | Sbjct 24563 ATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCTTTTACATTC 24504 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||| ||||| || ||| Sbjct 24503 TCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACA 24444 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 24443 AAAATTTGCAT 24433 >seq3254 Length=450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269 ||||| ||||| || ||||| ||||| ||||| ||||| || ||||| ||| | Sbjct 281 ATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTGCCTTTTACATTC 340 Query 45270 TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACA 45329 |||| || || || | || ||||| | || | |||||||||||| ||||| || || Sbjct 341 TCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAAGAGTCTTAACG 400 Query 45330 AAAATTTGCAT 45340 ||||||||||| Sbjct 401 AAAATTTGCAT 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451958050530360