Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20britovi_20[genbank_20GCA_5F001447585.1_202015-11-24]
7,991 sequences; 51,504,795 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq22 105 6e-18
>seq22
Length=309055
Score = 105 bits (116), Expect = 6e-18
Identities = 168/238 (71%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724
||||||| || || |||||||||||||| ||||||| |||||||| | ||| | | |
Sbjct 282227 CCTCGTCACGAGAGATCAGCTCGTTGCTGAACGTCAAACCGGGCATCAGGCCGCGCTTTT 282286
Query 120725 TGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGG 120784
| | |||| || | || |||||||| |||||||| | ||| || || || || |
Sbjct 282287 TCAACCAGAAAATTGACGCGAAGCTGCCGGAAAAGAAAATGCCTTCAACAGCTGCGAACG 282346
Query 120785 CGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT---CGATCCACTTCATGGCCCACT 120841
|||||| || ||| ||| | | || || | || ||||||| || ||||| |
Sbjct 282347 CGACCAAACGTTCG--CAAAAT-GGCGACTGACGGTCACCGATCCAGCGCAAAGCCCAGT 282403
Query 120842 CGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCTC 120899
| |||||||| ||||||||| || ||||| |||||| | ||| | || |||||
Sbjct 282404 CTGCCTTTTTCTTCACGCACGGAATGGTCTCGATCGCGTTGAACAGAAAATCACGCTC 282461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483372512304840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |