Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20britovi_20[genbank_20GCA_5F001447585.1_202015-11-24]
7,991 sequences; 51,504,795 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq351 86.0 4e-12
seq286 86.0 4e-12
>seq351
Length=21764
Score = 86.0 bits (94), Expect = 4e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | |||||| || |||||||| || ||||||||||| || ||||| ||||||||
Sbjct 19260 CCACCGCGCAAACGCAAAACCAAATGAAGCGTGCTCTCTTTCTGAATGTTATAATCGGAC 19201
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
| || ||| |||| ||||| ||||| || | |||
Sbjct 19200 AAAGTACGTCCGTCTTCCAACTGTTTGCCTGAAAA 19166
>seq286
Length=43880
Score = 86.0 bits (94), Expect = 4e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | |||||| || |||||||| || ||||||||||| || ||||| ||||||||
Sbjct 23233 CCACCGCGCAAACGCAAAACCAAATGAAGCGTGCTCTCTTTCTGAATGTTATAATCGGAC 23174
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
| || ||| |||| ||||| ||||| || | |||
Sbjct 23173 AAAGTACGTCCGTCTTCCAACTGTTTGCCTGAAAA 23139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328671987414720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |