Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20britovi_20[genbank_20GCA_5F001447585.1_202015-11-24] 7,991 sequences; 51,504,795 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq67 84.2 2e-11 >seq67 Length=189510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 147505 TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTG 147564 || || || ||||||| ||||||||| |||||||| |||| |||||||||||| Sbjct 40277 TATTGAACAATTTCGGTGCACAGGTTTGAACATTTTATAGTACCCAGATTTTGCTGATTC 40218 Query 147565 CTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTT 147624 ||| | ||||||||| |||||| ||| ||| ||||| |||||| || | ||| | Sbjct 40217 GATTTTCTATTGCACGCATCTTTGTAGACCATAAACGGTGTGCCGGTTTCAATTTGAGAC 40158 Query 147625 TCAA 147628 |||| Sbjct 40157 TCAA 40154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476563592498760