Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq134 297 2e-74 seq182 134 1e-25 seq520 122 7e-22 seq365 122 7e-22 seq2483 109 4e-18 seq210 100 2e-15 seq30 93.3 3e-13 seq104 91.5 1e-12 seq7 86.0 5e-11 >seq134 Length=108639 Score = 297 bits (328), Expect = 2e-74 Identities = 397/548 (72%), Gaps = 8/548 (1%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||||| || || ||||| || || || || ||||||||||| || | || |||||||| Sbjct 12651 GCTATTGGAATTGATTTGGGTACTACGTACAGTTGTGTTGGCGTGTTCCAGCATGGTAAA 12710 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 ||||||||||||||||| |||||||| || | || || ||| ||||||| ||||||| Sbjct 12711 GTTGAAATTATTGCCAACGATCAAGGGAATCGTACCACGCCAAGTTATGTTGCTTTCACC 12770 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAAT 550171 || || |||| | |||| ||||| |||||| |||||| | |||||| ||| Sbjct 12771 GATACCGAACGACTGATTGGAGATGCGGCAAAAAATCAAGTTGCGTTGAATCCTCATAAT 12830 Query 550172 ACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 || |||||||||| || || | || || | | ||| ||||| | | || ||| | Sbjct 12831 ACAGTTTTTGATGCGAAGCGACTCATCGGTCGTCGATTTGATGATGCTGCGGTGCAGTCT 12890 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGA---AAACCTTATATTGAA 550288 |||||||| |||||||| ||| ||||| | || | |||| |||||| | ||| || Sbjct 12891 GATATGAAACATTGGCCATTCAAAATTATCAACG---ATGGATCGAAACCTAAAATTCAA 12947 Query 550289 G-CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTT 550347 | | | | | |||| || |||| |||||||| |||| ||||||| || Sbjct 12948 GTCGAAT-ACAAAGGCGAGTCGAAGTCATTTACACCAGAAGAAATCAGTGCTATGGTGTT 13006 Query 550348 AATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAAT 550407 | |||| ||||| |||| ||| |||| | | || || |||| |||||| ||||| Sbjct 13007 AGTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGATGCCGTAAT 13066 Query 550408 AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTAT 550467 ||||| || ||||||||||| || || || ||||| || || ||||| |||||| || Sbjct 13067 TACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGGAACGAT 13126 Query 550468 TGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | |||| | |||||| | ||||| ||||| ||||| || || |||||| |||| ||||| Sbjct 13127 TTCTGGTTTGAATGTTTTGCGTATCATCAACGAACCAACAGCGGCTGCAATTGCTTATGG 13186 Query 550528 ACTTGATA 550535 |||||||| Sbjct 13187 ACTTGATA 13194 Score = 87.8 bits (96), Expect = 1e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 || || || |||||||| ||||| || || ||||||||||||||||| || ||||||||| Sbjct 14226 GGAATCCCACCTGCTCCACGTGGTGTTCCACAAATTGAAGTTACTTTTGACATCGATGCC 14285 Query 552567 AATGGAATTTTGAATGTGACTGC 552589 || || |||||||| || |||| Sbjct 14286 AACGGCATTTTGAACGTTTCTGC 14308 >seq182 Length=91112 Score = 134 bits (148), Expect = 1e-25 Identities = 139/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 || ||| |||||||| | |||||||| ||||||||||| ||| ||| |||| | | Sbjct 35557 CCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAAGAAATTGCCGAGGCTTATTTG 35616 Query 550382 GGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGT 550441 || ||||||| | |||| || | || || ||||| ||||| || || |||||||| Sbjct 35617 GGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCAGCTTATTTCAACGATGCACAACGT 35676 Query 550442 CAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAA 550501 |||||||| |||||||| || |||||||| ||||||||| |||| || ||||| ||| Sbjct 35677 CAAGCTACCAAAGATGCAGGCACCATTGCTGGTCTTAATGTTGTTCGAATCATCAACGAA 35736 Query 550502 CC 550503 || Sbjct 35737 CC 35738 Score = 100 bits (110), Expect = 2e-15 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 552432 GTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGT 552491 ||||| |||||| |||| ||||| ||| || | | || ||||| ||| ||| ||||| Sbjct 36700 GTTACTATTCAAGTTTTCGAAGGCGAACGACCAATGACCAAAGACAATCATCTTCTTGGG 36759 Query 552492 ACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACT 552551 | || || | || || ||||| ||||| ||||| ||||| |||||||||||||| Sbjct 36760 AAATTCGATCTGACCGGCATACCTCCGGCTCCGCGTGGGGTACCACAAATTGAAGTTACA 36819 Query 552552 TTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||||||| || | || || |||||| | || || || Sbjct 36820 TTCGATATTGACGTGAACGGCATTTTGCACGTCACCGC 36857 >seq520 Length=13491 Score = 122 bits (134), Expect = 7e-22 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 9469 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 9528 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| |||||||| Sbjct 9529 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCTAAGGTGATCGTTTTGCCAGTAAG 9587 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 9588 AGTCTTAACGAAAATTTGCAT 9608 Score = 122 bits (134), Expect = 7e-22 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 10319 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10378 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| |||||||| Sbjct 10379 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCTAAGGTGATCGTTTTGCCAGTAAG 10437 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 10438 AGTCTTAACGAAAATTTGCAT 10458 Score = 113 bits (124), Expect = 4e-19 Identities = 111/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 9185 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 9244 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| || || || Sbjct 9245 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCTAAGGTGATCGTTTTGCCGGTTAG 9303 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 9304 AGTCTTAACGAAAATTTGCAT 9324 Score = 113 bits (124), Expect = 4e-19 Identities = 111/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 10035 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10094 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| || || || Sbjct 10095 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCTAAGGTGATCGTTTTGCCGGTTAG 10153 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 10154 AGTCTTAACGAAAATTTGCAT 10174 Score = 95.1 bits (104), Expect = 1e-13 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | | || ||||| || |||||||| ||||||||||||||||| Sbjct 9748 TTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 9807 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 ||| || || |||||||||| || ||| ||| | ||| | ||||| ||||| Sbjct 9808 CCTTTCACATTTTCTATTGTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCCAGT 9866 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||||| ||||||||||| Sbjct 9867 AAGAGTCTTAACAAAAATTTGCAT 9890 Score = 95.1 bits (104), Expect = 1e-13 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | | || ||||| || |||||||| ||||||||||||||||| Sbjct 10598 TTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 10657 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 ||| || || |||||||||| || ||| ||| | ||| | ||||| ||||| Sbjct 10658 CCTTTCACATTTTCTATTGTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCCAGT 10716 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||||| ||||||||||| Sbjct 10717 AAGAGTCTTAACAAAAATTTGCAT 10740 Score = 86.0 bits (94), Expect = 5e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||| ||||||||||||||||| | Sbjct 10885 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10944 Query 563395 TTTACTGCCTCAATTGTATCAG 563416 ||||| ||| |||||||||| Sbjct 10945 TTTACATTCTCTATTGTATCAG 10966 >seq365 Length=37953 Score = 122 bits (134), Expect = 7e-22 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || |||||||||||||||||||||||||| | Sbjct 17417 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 17476 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| || ||||| Sbjct 17477 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCCAAGGTGATCGTTTTGCCGGTAAG 17535 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||||||||||||||| Sbjct 17536 AGTCTTAACGAAAATTTGCAT 17556 Score = 104 bits (114), Expect = 2e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || ||||||||||| ||||| || ||||| | Sbjct 22299 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 22358 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || ||| ||| | || | ||||| || ||||| Sbjct 22359 TTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCTAAGGTGATCGTTTTGCCGGTAAG 22417 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||| ||||| ||||||||||| Sbjct 22418 AGTCTTAACAAAAATTTGCAT 22438 Score = 100 bits (110), Expect = 2e-15 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 563329 TGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATT 563388 || || || |||||||| | | ||| ||||| || ||||||||||| ||||| || ||| Sbjct 22853 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATT 22912 Query 563389 TTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACC 563447 || ||| || ||||||||||||| || ||| ||| | ||| | ||||| || Sbjct 22913 TTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCC 22971 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| || ||||||||||||||||| Sbjct 22972 AGTAAGGGTCTTAACGAAAATTTGCAT 22998 Score = 100 bits (110), Expect = 2e-15 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || |||||||| | | ||| ||||| || ||||||||||| ||||| || ||||| Sbjct 28382 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 28441 Query 563392 TGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGT 563450 |||||| ||| |||||||||| || ||| ||| | || | ||||| || || Sbjct 28442 CCTTTTACATTCTCTATTGTATCAGATGGTTCTAC-TTCCAAGGTGATCGTTTTGCCGGT 28500 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||||||||||||||||| Sbjct 28501 AAGAGTCTTAACGAAAATTTGCAT 28524 Score = 100 bits (110), Expect = 2e-15 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 563329 TGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATT 563388 || || || |||||||| | | ||| ||||| || ||||||||||| ||||| || ||| Sbjct 28659 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATT 28718 Query 563389 TTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACC 563447 || ||| || ||||||||||||| || ||| ||| | ||| | ||||| || Sbjct 28719 TTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCC 28777 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| || ||||||||||||||||| Sbjct 28778 AGTAAGGGTCTTAACGAAAATTTGCAT 28804 Score = 93.3 bits (102), Expect = 3e-13 Identities = 107/141 (76%), Gaps = 6/141 (4%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| | | ||||||||| || ||||||||||| ||||| || ||||| | Sbjct 22583 CCAGCAAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 22642 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| ||||||| || ||| ||| | ||| | ||||| |||||||| Sbjct 22643 TTTACATTCTC----GTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCCAGTAAG 22697 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||||||||||||||| Sbjct 22698 GGTCTTAACGAAAATTTGCAT 22718 Score = 91.5 bits (100), Expect = 1e-12 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | | ||| ||||| || |||||||||||||||||||||||||| Sbjct 27818 TTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTC 27877 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 ||| || || |||||||||| || | || ||| | || | ||||| ||||| Sbjct 27878 CCTTTCACATTTTCTATTGTATCAG-ATGGTTCCACTTCCAATGTGATGGTTTTGCCAGT 27936 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||||||||| Sbjct 27937 GAGGGTCTTAACAAAAATTTGCAT 27960 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | ||||||||| || ||||||||||| ||||| || ||||| | Sbjct 27533 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 27592 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||| |||||||||| || | || || | || | ||||| ||||| || Sbjct 27593 TTTACATTCTCTATTGTATCAG-ATGGTTCCACCTCCAATGTGATGGTTTTGCCAGTGAG 27651 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || || || ||||||||||| Sbjct 27652 GGTCTTGACAAAAATTTGCAT 27672 Score = 86.0 bits (94), Expect = 5e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || |||||||| || | || ||||| ||||||||||| || ||||||||||| || | Sbjct 17134 CCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCCCT 17193 Query 563395 TTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAG 563453 || || ||||| ||||||| || | || ||| | || | ||||| ||||| || Sbjct 17194 TTCACATTCTCAACAGTATCAG-ATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAG 17252 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 || ||||| ||||||||||| Sbjct 17253 GGTCTTAACAAAAATTTGCAT 17273 Score = 86.0 bits (94), Expect = 5e-11 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || || ||||| | | ||| ||||| || ||||||||||| ||||| || ||||| Sbjct 28100 TTACCAGCGAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTC 28159 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGT 563450 ||| || ||||||||||||| || | || ||| | || | ||||| ||||| Sbjct 28160 CCTTTCACATTTTCAATTGTATCAG-ATGGTTCCACTTCCAATGTGATGGTTTTTCCAGT 28218 Query 563451 AAGAGTTTTAACGAAAATTTGCAT 563474 ||| || ||||| ||||||||||| Sbjct 28219 AAGGGTCTTAACAAAAATTTGCAT 28242 >seq2483 Length=432 Score = 109 bits (120), Expect = 4e-18 Identities = 114/147 (78%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 563329 TGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATT 563388 || || || |||||||| | | ||| ||||| || |||||||| ||||||||||||||| Sbjct 239 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 180 Query 563389 TTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACC 563447 ||| ||| || || |||||||||| || ||| ||| | ||| | ||||| || Sbjct 179 TTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTAC-TTCCAAAGTTATTGTTTTTCC 121 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| || ||||||||||||||||| Sbjct 120 AGTAAGGGTCTTAACGAAAATTTGCAT 94 >seq210 Length=82828 Score = 100 bits (110), Expect = 2e-15 Identities = 122/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 370652 TGCAACTGATGATGAAATTAAAAAAGCATACAAAAAACTAGCAATGAAATATCATCCTGA 370711 ||| || || |||||||| |||||||| || || | || |||||||||||||||| Sbjct 76538 TGCCACGGAAGATGAAATCAAAAAAGCTTATCGGAAGATGGCGTTGAAATATCATCCTGA 76479 Query 370712 TAGAAACAAAAGTCCTGATGCTGAAGAAAAGTTTaaaaaaaTTAGCA-ATGCACATGGTA 370770 | |||||||| ||||| || ||| ||||||||| | ||| ||| | ||| | | | Sbjct 76478 CAAGAACAAAAGCCCTGACGCAGAAAGCAAGTTTAAAGAGATT-GCAGAAGCATACGATG 76420 Query 370771 TTCTTTCTGATCCTGAAAAGAAACAAACTTATGATAGATTTGGT 370814 |||| |||| || |||||||| ||| || |||| ||||||| Sbjct 76419 TTCTGAGTGATGCTAAAAAGAAAGAAATATACGATAAATTTGGT 76376 >seq30 Length=209122 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 367540 GAACGTATTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTC 367599 ||||| |||| ||||||| || | |||||||| |||||||| | || | | |||| Sbjct 66451 GAACGGCTTGGTCGATGGATAGATTTTAAAAATGACTATAAAACTTTATATCCAAGTTTC 66510 Query 367600 ATGGAATCTGTTATTTGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGT 367659 ||||||||||| |||| ||| ||||| | || | ||| | | | |||| Sbjct 66511 ATGGAATCTGTATGGTGGGTATTCAAACAGCTGTATAACAAAGGTCTTGTCTACAGAGGT 66570 Query 367660 TATAAAGTAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAA 367719 ||||| ||||||| ||| |||| ||| ||| | |||||| |||||||| | | Sbjct 66571 GTAAAAGTGATGCCATTTTCTACTGCTTGCGGGACTCCATTGTCAAATTTTGAATCTGGA 66630 Query 367720 CAAAATTATCGAGAAGTAGTTGATCC 367745 |||||||| |||||| ||||||| Sbjct 66631 CAAAATTACAAAGAAGTCATTGATCC 66656 >seq104 Length=129113 Score = 91.5 bits (100), Expect = 1e-12 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 563332 TTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTT 563391 || || ||||| || | ||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 102222 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 102163 Query 563392 TGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTAACAGTTTTACCAG 563449 ||| || || || || || || || || ||| || || | |||||| |||| Sbjct 102162 CTTTTAACATTTTCGATGGTGTC--TGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAG 102105 Query 563450 TAAGAGTTTTAACGAAAATTTGCATA 563475 |||| || || ||||| || |||||| Sbjct 102104 TAAGTGTCTTCACGAATATCTGCATA 102079 Score = 89.7 bits (98), Expect = 4e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 563335 CCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGT 563394 || ||||| || | || |||||||||||| ||||| ||||| |||||||||||||| | Sbjct 103218 CCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTT 103159 Query 563395 TTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAG 563453 ||||| ||||| ||||||| || ||| ||| | || | ||||| ||||| | Sbjct 103158 TTTACATTTTCAATCGTATCAGATGGCTCTAC-TTCCAATGTGATTGTTTTTCCAGTTAA 103100 Query 563454 AGTTTTAACGAAAATTTGCAT 563474 ||||| || ||||| ||||| Sbjct 103099 TGTTTTCACAAAAATCTGCAT 103079 >seq7 Length=317591 Score = 86.0 bits (94), Expect = 5e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||| ||||| || ||||||||||| || ||||| ||||||||||| ||||||||||| Sbjct 241592 GGTATACCTCCGGCCCCTCGTGGAGTTCCACAAATAGAAGTTACTTTTGATATCGATGCA 241533 Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGAT 552596 ||||| || | |||| | |||| | ||| Sbjct 241532 AATGGTATAGTTCATGTCAGTGCTCGAGAT 241503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029018779398580