Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq104 123 5e-23 seq365 120 5e-22 seq2483 118 2e-21 seq520 114 2e-20 >seq104 Length=129113 Score = 123 bits (136), Expect = 5e-23 Identities = 113/143 (79%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || |||| || || |||||||| || ||||| |||||||| |||||| Sbjct 103220 TACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTAC 103161 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 |||||||||| || ||||| || | |||||||| | || || ||||| ||||||| Sbjct 103160 TTTTTACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 103101 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 ||||||| | || ||||||||| Sbjct 103100 ATGTTTTCACAAAAATCTGCATT 103078 Score = 122 bits (134), Expect = 2e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || |||| || || ||||| || || ||||| |||||||| |||||| Sbjct 102648 TACCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTAC 102589 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 |||| ||||| || |||||||| | ||||||||| | || || ||||| ||||||| Sbjct 102588 TTTTCACATTTTCAATCGTATCTGATGGTTCTACTTCCAATGTGATTGTTTTTCCAGTTA 102529 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 ||||||| | || |||||||| Sbjct 102528 ATGTTTTCACAAAAATCTGCAT 102507 Score = 122 bits (134), Expect = 2e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 |||||||||| || |||| || || |||||||| || ||||| |||||||| |||||| Sbjct 102934 TACCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTAC 102875 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 |||| ||||| || |||||||| | |||||||| | || || ||||| ||||||| Sbjct 102874 TTTTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTA 102815 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 ||||||| | || |||||||| Sbjct 102814 ATGTTTTCACAAAAATCTGCAT 102793 Score = 118 bits (130), Expect = 2e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||| ||||| |||||||| || || ||||| || || ||||| ||||| || |||||| Sbjct 102222 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 102163 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 |||| ||||| || || ||||| | ||| |||||||| || || ||||| ||||| Sbjct 102162 CTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 102103 Query 172047 AATGTTTTAATGAATATCTGCAT 172069 | ||| || | |||||||||||| Sbjct 102102 AGTGTCTTCACGAATATCTGCAT 102080 >seq365 Length=37953 Score = 120 bits (132), Expect = 5e-22 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 |||||||||||||| | | ||||| || ||||| ||||| |||||||| || |||||| Sbjct 29628 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 29687 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 || ||||| || || ||||| | ||| ||||| |||||||||||||| ||||| Sbjct 29688 CCCTTCACATTTTCAATTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 29747 Query 172047 AATGTTTTAATGAATATCTGCATTTT 172072 | ||||| | |||||||||||||| Sbjct 29748 AGAGTTTTCACAAATATCTGCATTTT 29773 Score = 116 bits (128), Expect = 7e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | |||||| || ||||| || |||||||| ||||| || || Sbjct 29297 TACCAGCAAAAATCAGCCGCTGTTGATCTGGTGGAATGCCTTCTTTGTCTTGAATCTTGC 29356 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 |||||||||| || |||||||||| || ||||| || ||||| ||||| || || | Sbjct 29357 TTTTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCA 29416 Query 172048 ATGTTTTAATGAATATCTGCAT 172069 | ||||| | ||||||||||| Sbjct 29417 ACGTTTTCACAAATATCTGCAT 29438 Score = 114 bits (126), Expect = 2e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||| |||||||||||||| || | ||||| || ||||| |||||||| ||||| || Sbjct 28375 CAATTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 28434 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 |||||| ||||||||| ||| ||||| || | ||||||||| | || || ||||| Sbjct 28435 TATTTTGCCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTT 28494 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || || | || |||| ||| || |||||| Sbjct 28495 GCCGGTAAGAGTCTTAACGAAAATTTGCATT 28525 Score = 113 bits (124), Expect = 8e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 || || |||||||||||||| || | ||||| || ||||| |||||||| ||||| ||| Sbjct 22850 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGT 22909 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| ||| ||||| || ||||| || | ||||||||| | ||| || ||||| Sbjct 22910 ATTTTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 22969 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || |||| ||| || |||||| Sbjct 22970 CCAGTAAGGGTCTTAACGAAAATTTGCATT 22999 Score = 113 bits (124), Expect = 8e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 || || |||||||||||||| || | ||||| || ||||| |||||||| ||||| ||| Sbjct 28656 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGT 28715 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| ||| ||||| || ||||| || | ||||||||| | ||| || ||||| Sbjct 28716 ATTTTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 28775 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || |||| ||| || |||||| Sbjct 28776 CCAGTAAGGGTCTTAACGAAAATTTGCATT 28805 Score = 107 bits (118), Expect = 3e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 171927 TTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTA 171986 ||||||||||| || || | ||||| || ||||| ||||||||||||||||| ||||| Sbjct 27818 TTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTC 27877 Query 171987 TTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTT 172046 ||| ||||| ||| ||||| || | ||| ||||| | || |||||||| ||||| Sbjct 27878 CCTTTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTG 27937 Query 172047 AATGTTTTAATGAATATCTGCATT 172070 | || |||| || || |||||| Sbjct 27938 AGGGTCTTAACAAAAATTTGCATT 27961 Score = 105 bits (116), Expect = 1e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||||||||||||||| ||||| Sbjct 17415 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGC 17474 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||| | || || ||||| || || | Sbjct 17475 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAA 17534 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 17535 GAGTCTTAACGAAAATTTGCATT 17557 Score = 104 bits (114), Expect = 4e-17 Identities = 109/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| || | || || || ||||| |||||||| ||||| |||||||| Sbjct 22581 TACCAGCAAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTGC 22640 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||| || | ||||| || | ||||||||| | ||| || ||||| ||||| | Sbjct 22641 CTTTTACA----TTCTCGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCAGTAA 22696 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 22697 GGGTCTTAACGAAAATTTGCATT 22719 Score = 100 bits (110), Expect = 5e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| |||||||| ||||| |||||||| Sbjct 22297 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGC 22356 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||||| || || ||||| || || | Sbjct 22357 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAA 22416 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| || || |||||| Sbjct 22417 GAGTCTTAACAAAAATTTGCATT 22439 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | |||||| || || || ||||| || |||||||| || || Sbjct 17132 TACCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCC 17191 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||| ||||| | |||||| || | ||| ||||| | || |||||||| ||||||| Sbjct 17192 CTTTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTA 17251 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| || || |||||| Sbjct 17252 GGGTCTTAACAAAAATTTGCATT 17274 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||| |||||||||||||| || | ||||| || ||||| |||||||| ||||| || Sbjct 17689 CAATTACTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTG 17748 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTC 172024 |||||| ||| ||||| ||| ||||| || | ||||||||| Sbjct 17749 TATTTTGCCTTTCACATTCTCTATTGTATCAGATGGTTCTACTTC 17793 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| |||||||| ||||| |||||||| Sbjct 27531 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGC 27590 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||| || || | || |||||||| ||||| | Sbjct 27591 CTTTTACATTCTCTATTGTATCAGATGGTTCCACCTCCAATGTGATGGTTTTGCCAGTGA 27650 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || || | || || |||||| Sbjct 27651 GGGTCTTGACAAAAATTTGCATT 27673 >seq2483 Length=432 Score = 118 bits (130), Expect = 2e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 || || |||||||||||||| || | ||||| || ||||| ||||| ||||||||||| Sbjct 242 AACTGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGA 183 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 ||||| ||| ||||| ||| ||||| || | ||||||||| | ||| || ||||| Sbjct 182 ATTTTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTT 123 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || |||| ||| || |||||| Sbjct 122 CCAGTAAGGGTCTTAACGAAAATTTGCATT 93 >seq520 Length=13491 Score = 114 bits (126), Expect = 2e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||| ||||||||||| || || | |||||| || ||||| ||||| ||||||||||| Sbjct 9741 CAATTACTTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 9800 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| ||| ||||| ||| ||||| || | ||||||||| | ||| || ||||| Sbjct 9801 AATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTT 9860 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || |||| || || |||||| Sbjct 9861 TCCAGTAAGAGTCTTAACAAAAATTTGCATT 9891 Score = 114 bits (126), Expect = 2e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 171920 CAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTG 171979 ||||| ||||||||||| || || | |||||| || ||||| ||||| ||||||||||| Sbjct 10591 CAATTACTTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTG 10650 Query 171980 TATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTT 172039 ||||| ||| ||||| ||| ||||| || | ||||||||| | ||| || ||||| Sbjct 10651 AATTTTGCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTT 10710 Query 172040 ACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || |||| || || |||||| Sbjct 10711 TCCAGTAAGAGTCTTAACAAAAATTTGCATT 10741 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 9183 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGC 9242 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||||| || || ||||| || |||| Sbjct 9243 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTA 9302 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 9303 GAGTCTTAACGAAAATTTGCATT 9325 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 9467 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGC 9526 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||||| || || ||||| ||||| | Sbjct 9527 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCAGTAA 9586 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 9587 GAGTCTTAACGAAAATTTGCATT 9609 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 10033 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGC 10092 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||||| || || ||||| || |||| Sbjct 10093 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTA 10152 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 10153 GAGTCTTAACGAAAATTTGCATT 10175 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 10317 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGC 10376 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||||||| ||| ||||| || | ||||||||||| || || ||||| ||||| | Sbjct 10377 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCAGTAA 10436 Query 172048 ATGTTTTAATGAATATCTGCATT 172070 || |||| ||| || |||||| Sbjct 10437 GAGTCTTAACGAAAATTTGCATT 10459 Score = 91.5 bits (100), Expect = 3e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 171928 TACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTAT 171987 ||||||||||||| | | || || || ||||| ||||| ||||||||||| ||||| Sbjct 10883 TACCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGC 10942 Query 171988 TTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 ||||||||| ||| ||||| || | ||||||||||| || || ||||| || || Sbjct 10943 CTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGT 11000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905076690963600