Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq68 102 8e-17
>seq68
Length=159368
Score = 102 bits (112), Expect = 8e-17
Identities = 167/238 (70%), Gaps = 6/238 (3%)
Strand=Plus/Minus
Query 120665 CCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCT 120724
||||||| || || |||||||||||||| ||||||| |||||||| | ||| | | |
Sbjct 129752 CCTCGTCACGAGAGATCAGCTCGTTGCTGAACGTCAAACCGGGCATCAGGCCGCGCTTTT 129693
Query 120725 TGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGG 120784
| | |||| || | || |||||||| |||||||| | ||| || || || || |
Sbjct 129692 TCAACCAGAAAATTGACGCGAAGCTGCCGGAAAAGAAAATGCCTTCAACAGCTGCGAACG 129633
Query 120785 CGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT---CGATCCACTTCATGGCCCACT 120841
|||||| || ||| ||| | | || || | || ||||||| || ||||| |
Sbjct 129632 CGACCAAACGTTCG--CAAAAT-GGCGACTGACGGTCACCGATCCAGCGCAAAGCCCAGT 129576
Query 120842 CGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATGTCGCGCTC 120899
| || ||||| ||||||||| || ||||| |||||| | ||| | || |||||
Sbjct 129575 CTGCTTTTTTCTTCACGCACGGAATGGTCTCGATCGCGTTGAACAGAAAATCACGCTC 129518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483389123852080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |