Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24]
5,242 sequences; 49,016,728 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq134 363 5e-95
seq182 156 1e-32
seq104 156 1e-32
seq520 138 3e-27
seq365 138 3e-27
seq2483 125 2e-23
seq749 107 6e-18
seq80 93.3 1e-13
seq103 89.7 2e-12
seq1136 84.2 7e-11
>seq134
Length=108639
Score = 363 bits (402), Expect = 5e-95
Identities = 565/804 (70%), Gaps = 5/804 (1%)
Strand=Plus/Plus
Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258
||||| ||||| ||||| |||||||| || |||||||| || | || ||| |
Sbjct 12651 GCTATTGGAATTGATTTGGGTACTACGTACAGTTGTGTTGGCGTGTTCCAGCATGGTAAA 12710
Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318
|| ||||| ||||| || |||||||| || | || |||||| || ||||| || |||
Sbjct 12711 GTTGAAATTATTGCCAACGATCAAGGGAATCGTACCACGCCAAGTTATGTTGCTTTCACC 12770
Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378
|| || || || ||||||| ||| | ||||||||||||| ||| ||||| | |||
Sbjct 12771 GATACCGAACGACTGATTGGAGATGCGGCAAAAAATCAAGTTGCGTTGAATCCTCATAAT 12830
Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438
|| ||||||||||| |||||||| || ||| | | ||| ||| | || |||
Sbjct 12831 ACAGTTTTTGATGCGAAGCGACTCATCGGTCGTCGATTTGATGATGCTGCGGTGCAGTCT 12890
Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498
||| | ||||||| || || | || | || || || ||||| | ||| |
Sbjct 12891 GATATGAAACATTGGCCATTCAAAATTATC---AACGATGGATCGAAACCTAAAATTCAA 12947
Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTA 349558
|| ||||| ||||| || || |||| ||| |||||||| | ||||| |||
Sbjct 12948 GTCGAATACAAAGGCGAGTCGAAGTCATTTACACCAGAAGAAATCAGTGCTATGGTGTTA 13007
Query 349559 GTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATT 349618
|| || |||||||||| ||| ||||| ||||| || |||| || | ||||| || |||
Sbjct 13008 GTGAAGATGAAGGAAACTGCCGAAGCTTATTTGGGAAAAACTGTTAAGGATGCCGTAATT 13067
Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678
||||| || || |||||||| ||| | |||||| || || ||||| ||||| | |||
Sbjct 13068 ACTGTTCCGGCATATTTTAACGATTCTCAGCGTCAGGCGACCAAAGACGCTGGAACGATT 13127
Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738
| || || |||||| | | || || || ||||| || || || |||||||| |||||
Sbjct 13128 TCTGGTTTGAATGTTTTGCGTATCATCAACGAACCAACAGCGGCTGCAATTGCTTATGGA 13187
Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798
||||||| || | ||| | ||| |||| |||| || ||||| | ||||||||||||
Sbjct 13188 CTTGATAGAAAGGGTGGCGGTGAACGAAATGTTCTGATATTTGACCTTGGTGGTGGTACT 13247
Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858
|||||||| || | | || | ||||| || |||||||| || || | || ||||||
Sbjct 13248 TTTGATGTGTCTATTTTGACCATCGAAGATGGCATTTTTGAGGTCAAGTCTACCGCTGGT 13307
Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAA 349918
|| || ||| | ||||| || || || || ||||| | || ||||| || ||
Sbjct 13308 GACACTCATTTGGGTGGTGAGGACTTCGACAATCGCATGGTAAATCATTTCGTGGCCGAG 13367
Query 349919 TTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAG 349977
|||||||| |||| || | || || | |||||| | ||| |||||||| | |
Sbjct 13368 TTTAAGCG-CAAGAACAAGAAGGACATGTCATCTAATCCACGCGCATTGCGTCGCTTGCG 13426
Query 349978 AACTGCGTGTGAACGTGCTAAGCG 350001
|| || |||||||| || |||||
Sbjct 13427 CACAGCTTGTGAACGAGCGAAGCG 13450
Score = 107 bits (118), Expect = 6e-18
Identities = 191/277 (69%), Gaps = 4/277 (1%)
Strand=Plus/Plus
Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089
|||||||||||| || || |||| ||||||| | |||||||| | |||||
Sbjct 13539 ATTGAAATTGATAGCCTCTACGAAGGCATTGATTTCTACACCACTATTACAAGAGCTCGC 13598
Query 350090 TTTGAAGAATTATGTATG--GATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTAT 350147
|| ||||| || | ||| || | || | | || |||| || || |||||||
Sbjct 13599 TTCGAAGAGTT--GAATGCTGACTTGTTCCGTTCTACTTTGGAACCAGTAGAAAAAGCTC 13656
Query 350148 TAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTA 350207
| ||||| ||| | |||| |||| ||||||| ||||| || || |||||||
Sbjct 13657 TTCGTGATGCGAAATTAGACAAAGCAGTGATTCATGAAGTTGTTTTGGTGGGCGGTTCTA 13716
Query 350208 CACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTA 350267
| || ||||| |||||||| |||| | || ||||||||||| ||||||| | |
Sbjct 13717 CTCGCATTCCTAAAGTTCAGAAGTTGTTGCAAGATTTTTTTAATGGGAAAGAACTTAACA 13776
Query 350268 GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGC 350304
| || ||||| || ||||||||||| ||||| ||
Sbjct 13777 AAAGCATCAATCCCGACGAAGCTGTTGCCTATGGAGC 13813
Score = 96.9 bits (106), Expect = 1e-14
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 183570 TTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATATCT 183629
|| ||||||||||| ||||| | | ||||| |||| | ||||||| || || ||
Sbjct 13447 TTCGCTCGTTCACAAGCTGTGCGCAAGCGACGCAATGCGCGTGGATTAGATGACATGTCC 13388
Query 183630 TGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCT 183689
| || | || | ||||| || | | ||||| | | | | | || || ||
Sbjct 13387 TTCTTGTTCTTGCGCTTAAACTCGGCCACGAAATGATTTACCATGCGATTGTCGAAGTCC 13328
Query 183690 TCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATA 183749
|||||||| ||||| || || ||||| |||| || || ||||| || || ||||| ||
Sbjct 13327 TCACCACCCAAATGAGTGTCACCAGCGGTAGACTTGACCTCAAAAATGCCATCTTCGATG 13268
Query 183750 TTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
| ||||| || |||||||| ||||||||||| | |||||
Sbjct 13267 GTCAAAATAGACACATCAAAAGTACCACCACCAAGGTCAAA 13227
Score = 84.2 bits (92), Expect = 7e-11
Identities = 189/279 (68%), Gaps = 4/279 (1%)
Strand=Plus/Minus
Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA-TTCTTTGCCATTA 183320
|||| ||||| ||||||||||| || || || || | | ||| |||||| ||||||
Sbjct 13815 CTGCTCCATAGGCAACAGCTTCGTCGGGATTGAT-GCTTTTGTTAAGTTCTTTCCCATTA 13757
Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380
||||| ||| | || | |||| ||| ||||| | ||| ||||| || || || ||
Sbjct 13756 AAAAAATCTTGCAACAACTTCTGAACTTTAGGAATGCGAGTAGAACCGCCCACCAAAACA 13697
Query 183381 ACTTCATCGAT-ATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTC 183439
||||||| || | | |||| ||||||| | ||| | | ||||||| || || ||
Sbjct 13696 ACTTCATGAATCACTGCTTTGTCTAATTT-CGCATCACGAAGAGCTTTTTCTACTGGTTC 13638
Query 183440 CATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGa 183499
|| ||| | || || || | |||||||| || | ||||| || | || |
Sbjct 13637 CAAAGTAGAACGGAACAAGTCAGCATTCAACTCTTCGAAGCGAGCTCTTGTAATAGTGGT 13578
Query 183500 aaaaaaGTCAATACCATTATATAAGGAATCAATTTCAAT 183538
| || ||||| || | || | | ||||||||||||
Sbjct 13577 GTAGAAATCAATGCCTTCGTAGAGGCTATCAATTTCAAT 13539
>seq182
Length=91112
Score = 156 bits (172), Expect = 1e-32
Identities = 328/485 (68%), Gaps = 8/485 (2%)
Strand=Plus/Plus
Query 349233 GTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAA 349292
|||||| |||| | |||| |||||| ||||| ||||| |||||||| || || |||
Sbjct 35258 GTGTTGGGGTTTTCAAGAATGGTCGTGTTGAAATTATTGCTAATGATCAGGGCAATCGAA 35317
Query 349293 CAACGCCATCATACGTTGCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAA 349349
|| || || || || || ||||| ||| |||||| |||| || || | || |
Sbjct 35318 TCACCCCGTCGTATGTAGCTTTTACGCCGGAAGGGGAGCGTCTGATCGGCGACGCCGCGA 35377
Query 349350 AAAATCAAGCTG-CTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGT 349408
||||||| | || | | ||||| | |||||||| || ||||| ||||| | | |||
Sbjct 35378 AAAATCA-GTTGACCACCAATCCTGAGAATACGGTATTCGATGCAAAGCGTATGGTCGGT 35436
Query 349409 AGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTT 349468
|| | || || || | ||| | |||| ||| | || ||| | || |||
Sbjct 35437 CGAGAATGGTCGGATAAGAGTCTTCAAGCGGATCGTAAAATGTGGCCATTTGCGGTGGTT 35496
Query 349469 CCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTT 349528
|||| | ||||| | || || || ||| |||||| | ||| ||
Sbjct 35497 GAAAAATCGAGC---AAACCGAACGTTCAGCTTACTGTTAACGGTGAAAAGAAATTGTTC 35553
Query 349529 TTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATAT 349588
||||||||||||||| | |||||||| | |||||||| |||||||| || || |||
Sbjct 35554 ACTCCCGAAGAAATTTCAGCGATGGTTTTGTTGAAAATGAAAGAAATTGCCGAGGCTTAT 35613
Query 349589 TTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAG 349648
|| || || ||| | |||| || | || || ||||| ||||| || ||||| ||
Sbjct 35614 TTGGGCAAAGAAGTGAAAAATGCCGTCGTCACGGTTCCAGCTTATTTCAACGATGCACAA 35673
Query 349649 CGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAAT 349708
||| || || |||||||| |||| |||||| || | |||||| | |||| || ||
Sbjct 35674 CGTCAAGCTACCAAAGATGCAGGCACCATTGCTGGTCTTAATGTTGTTCGAATCATCAAC 35733
Query 349709 GAACC 349713
|||||
Sbjct 35734 GAACC 35738
>seq104
Length=129113
Score = 156 bits (172), Expect = 1e-32
Identities = 119/141 (84%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || | |||||||||||||| ||||| ||||| ||||| ||||||||| |
Sbjct 103218 CCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTT 103159
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| ||||||| ||||||||| || ||||| | ||| | ||| ||||| |||| |
Sbjct 103158 TTTACATTTTCAATCGTATCAGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 103099
Query 140718 GTTTTTACAAAAATCTGCATT 140738
||||| |||||||||||||||
Sbjct 103098 GTTTTCACAAAAATCTGCATT 103078
Score = 149 bits (164), Expect = 2e-30
Identities = 117/140 (84%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || | |||||||||||||| ||||| ||||| ||||| ||||||||| |
Sbjct 102646 CCAGCAAATATCAATCGTTGCTGATCAGGCGGAATGCCTTCCTTATCTTGAATTTTACTT 102587
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| ||||||| ||| |||||||| ||||| | ||| | ||| ||||| |||| |
Sbjct 102586 TTCACATTTTCAATCGTATCTGATGGTTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 102527
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||| ||||||||||||||
Sbjct 102526 GTTTTCACAAAAATCTGCAT 102507
Score = 145 bits (160), Expect = 2e-29
Identities = 116/140 (83%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || | |||||||||||||| ||||| ||||| ||||| ||||||||| |
Sbjct 102932 CCAGCAAATATCAATCGTTGCTGATCAGGTGGAATGCCTTCCTTATCTTGAATTTTACTT 102873
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| ||||||| ||| ||||| || ||||| | ||| | ||| ||||| |||| |
Sbjct 102872 TTCACATTTTCAATCGTATCTGATGGCTCTACTTCCAATGTGATTGTTTTTCCAGTTAAT 102813
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||| ||||||||||||||
Sbjct 102812 GTTTTCACAAAAATCTGCAT 102793
Score = 136 bits (150), Expect = 1e-26
Identities = 116/143 (81%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| || |||||||||| | |||||||||||||||||| ||||| |||||||||||||||
Sbjct 102222 TTACCTGCAAAGATTAATCTTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTA 102163
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
||| ||||| || || | || |||||||||||||| ||||| | || ||||| ||
Sbjct 102162 CTTTTAACATTTTCGATGGTGTCTGATGGTTCAACTTCTAGTGTTATAGTTTTTCCAGTA 102103
Query 140715 AGTGTTTTTACAAAAATCTGCAT 140737
||||| || || || ||||||||
Sbjct 102102 AGTGTCTTCACGAATATCTGCAT 102080
>seq520
Length=13491
Score = 138 bits (152), Expect = 3e-27
Identities = 115/141 (82%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct 9185 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 9244
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || ||||||||
Sbjct 9245 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTAGA 9304
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 9305 GTCTTAACGAAAATTTGCATT 9325
Score = 138 bits (152), Expect = 3e-27
Identities = 115/141 (82%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct 10035 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10094
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || ||||||||
Sbjct 10095 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTTAGA 10154
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 10155 GTCTTAACGAAAATTTGCATT 10175
Score = 129 bits (142), Expect = 2e-24
Identities = 113/141 (80%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct 9469 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 9528
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || || || ||
Sbjct 9529 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCAGTAAGA 9588
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 9589 GTCTTAACGAAAATTTGCATT 9609
Score = 129 bits (142), Expect = 2e-24
Identities = 113/141 (80%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct 10319 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10378
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || || || ||
Sbjct 10379 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCAGTAAGA 10438
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 10439 GTCTTAACGAAAATTTGCATT 10459
Score = 125 bits (138), Expect = 2e-23
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || | ||| || ||||| || |||||||| |||||||| ||||||||
Sbjct 9748 TTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 9807
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|||| ||||| || || | |||||||||||| ||||| | || | ||| ||||| ||
Sbjct 9808 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCAGTA 9867
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| || || |||||||| ||||||
Sbjct 9868 AGAGTCTTAACAAAAATTTGCATT 9891
Score = 125 bits (138), Expect = 2e-23
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || | ||| || ||||| || |||||||| |||||||| ||||||||
Sbjct 10598 TTACCAGCAAATATCAAACGCTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATTTTG 10657
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|||| ||||| || || | |||||||||||| ||||| | || | ||| ||||| ||
Sbjct 10658 CCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCAGTA 10717
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| || || |||||||| ||||||
Sbjct 10718 AGAGTCTTAACAAAAATTTGCATT 10741
Score = 114 bits (126), Expect = 4e-20
Identities = 95/116 (82%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || |||||||| |||||||| |||||||| ||
Sbjct 10885 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCCTCTTTATCTTGAATTTTGCCT 10944
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|||||||| || || | |||||||||||| ||||| | || | || || |||||
Sbjct 10945 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGT 11000
>seq365
Length=37953
Score = 138 bits (152), Expect = 3e-27
Identities = 115/141 (82%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || ||||||||||||||||| |||||||| ||
Sbjct 17417 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCTTTATCTTGAATTTTGCCT 17476
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || ||||| ||
Sbjct 17477 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTAAGA 17536
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 17537 GTCTTAACGAAAATTTGCATT 17557
Score = 138 bits (152), Expect = 3e-27
Identities = 115/141 (82%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct 22299 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 22358
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| ||||| | || | || || ||||| ||
Sbjct 22359 TTTACATTCTCTATTGTATCAGATGGTTCTACTTCTAAGGTGATCGTTTTGCCGGTAAGA 22418
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || |||||||| ||||||
Sbjct 22419 GTCTTAACAAAAATTTGCATT 22439
Score = 134 bits (148), Expect = 4e-26
Identities = 116/144 (81%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || |||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct 29628 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 29687
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
| || ||||| ||||| | || || ||||| ||||| || |||| || || || ||
Sbjct 29688 CCCTTCACATTTTCAATTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCAGTC 29747
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| ||||| ||||| |||||||||
Sbjct 29748 AGAGTTTTCACAAATATCTGCATT 29771
Score = 132 bits (146), Expect = 1e-25
Identities = 114/141 (81%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct 27533 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 27592
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| || || | |||||||||||| || || | ||| | || || || || ||
Sbjct 27593 TTTACATTCTCTATTGTATCAGATGGTTCCACCTCCAATGTGATGGTTTTGCCAGTGAGG 27652
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || |||||||| ||||||
Sbjct 27653 GTCTTGACAAAAATTTGCATT 27673
Score = 131 bits (144), Expect = 5e-25
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
|| || |||||||| || | |||||| ||||| || ||||||||||| |||||||| |||
Sbjct 22853 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATT 22912
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
|| |||| ||||| ||||| | |||||||||||| ||||| | || | ||| |||||
Sbjct 22913 TTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 22972
Query 140712 GTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || || ||||| ||||||
Sbjct 22973 GTAAGGGTCTTAACGAAAATTTGCATT 22999
Score = 131 bits (144), Expect = 5e-25
Identities = 117/147 (80%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
|| || |||||||| || | |||||| ||||| || ||||||||||| |||||||| |||
Sbjct 28659 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATT 28718
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
|| |||| ||||| ||||| | |||||||||||| ||||| | || | ||| |||||
Sbjct 28719 TTCCCTTTCACATTTTCAATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 28778
Query 140712 GTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || || ||||| ||||||
Sbjct 28779 GTAAGGGTCTTAACGAAAATTTGCATT 28805
Score = 129 bits (142), Expect = 2e-24
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || | |||||| ||||| || ||||||||||||||||| ||||||||
Sbjct 27818 TTACCAGCAAATATCAAACGTTGTTGATCCGGTGGAATTCCTTCTTTATCTTGAATTTTC 27877
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|||| ||||| || || | |||||||||||| ||||| | ||| | || || || ||
Sbjct 27878 CCTTTCACATTTTCTATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTGCCAGTG 27937
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| || || |||||||| ||||||
Sbjct 27938 AGGGTCTTAACAAAAATTTGCATT 27961
Score = 129 bits (142), Expect = 2e-24
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| ||||| || || | |||||| ||||| || ||||||||||| |||||||| |||||
Sbjct 28100 TTACCAGCGAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTC 28159
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|||| ||||| ||||| | |||||||||||| ||||| | ||| | || ||||| ||
Sbjct 28160 CCTTTCACATTTTCAATTGTATCAGATGGTTCCACTTCCAATGTGATGGTTTTTCCAGTA 28219
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| || || |||||||| ||||||
Sbjct 28220 AGGGTCTTAACAAAAATTTGCATT 28243
Score = 125 bits (138), Expect = 2e-23
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || | |||||| ||||| || ||||||||||| |||||||| |||||
Sbjct 28382 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 28441
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTT 140714
|||||||||| || || | |||||||||||| ||||| | || | || || |||||
Sbjct 28442 CCTTTTACATTCTCTATTGTATCAGATGGTTCTACTTCCAAGGTGATCGTTTTGCCGGTA 28501
Query 140715 AGTGTTTTTACAAAAATCTGCATT 140738
|| || || || ||||| ||||||
Sbjct 28502 AGAGTCTTAACGAAAATTTGCATT 28525
Score = 123 bits (136), Expect = 8e-23
Identities = 112/141 (79%), Gaps = 4/141 (3%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || | |||||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct 22583 CCAGCAAAAATCAAACGTTGCTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 22642
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| ||| |||||||||||| ||||| | || | ||| ||||| || ||
Sbjct 22643 TTTACATT----CTCGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCAGTAAGG 22698
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || || ||||| ||||||
Sbjct 22699 GTCTTAACGAAAATTTGCATT 22719
Score = 122 bits (134), Expect = 3e-22
Identities = 111/140 (79%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || || || || ||||| || ||||| |||||||| || ||||| || |
Sbjct 29299 CCAGCAAAAATCAGCCGCTGTTGATCTGGTGGAATGCCTTCTTTGTCTTGAATCTTGCTT 29358
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|||||||| ||||| | ||| || || |||||||||||||||| || ||||| || |
Sbjct 29359 TTTACATTTTCAATTGTATCTGACGGCTCAACTTCAAGTGTAATCGTTTTTCCTGTCAAC 29418
Query 140718 GTTTTTACAAAAATCTGCAT 140737
||||| ||||| ||||||||
Sbjct 29419 GTTTTCACAAATATCTGCAT 29438
Score = 120 bits (132), Expect = 9e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || ||||| || ||||| ||||||||||| || ||||| ||||| || ||
Sbjct 17134 CCAGCAAAAATCAGACGCTGTTGATCTGGAGGAATTCCCTCCTTATCTTGAATCTTCCCT 17193
Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGT 140717
|| ||||| |||| | |||||||||||| ||||| | || | || || || |||||
Sbjct 17194 TTCACATTCTCAACAGTATCAGATGGTTCCACTTCCAACGTGATGGTTTTCCCAGTTAGG 17253
Query 140718 GTTTTTACAAAAATCTGCATT 140738
|| || |||||||| ||||||
Sbjct 17254 GTCTTAACAAAAATTTGCATT 17274
Score = 100 bits (110), Expect = 9e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 140595 TTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTA 140654
|| |||||||| || | |||||| ||||| || ||||||||||| |||||||| |||||
Sbjct 17696 TTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCTTCCTTATCCTGTATTTTG 17755
Query 140655 GCTTTTACATTATCAATCGAATCAGATGGTTCAACTTC 140692
|||| ||||| || || | |||||||||||| |||||
Sbjct 17756 CCTTTCACATTCTCTATTGTATCAGATGGTTCTACTTC 17793
>seq2483
Length=432
Score = 125 bits (138), Expect = 2e-23
Identities = 116/147 (79%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651
|| || |||||||| || | |||||| ||||| || |||||||| |||||||| ||||||
Sbjct 239 TGCTTACCAGCAAAAATCAAACGTTGTTGATCCGGTGGAATTCCCTCTTTATCTTGAATT 180
Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711
|| |||| ||||| || || | |||||||||||| ||||| | || | ||| |||||
Sbjct 179 TTTCCTTTCACATTTTCTATTGTATCAGATGGTTCTACTTCCAAAGTTATTGTTTTTCCA 120
Query 140712 GTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || || ||||| ||||||
Sbjct 119 GTAAGGGTCTTAACGAAAATTTGCATT 93
>seq749
Length=4598
Score = 107 bits (118), Expect = 6e-18
Identities = 77/89 (87%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657
|||||||| || |||||||||||||| || ||||||||||| |||||||| ||||| ||
Sbjct 89 CCAGCAAAAATCAGACGTTGCTGATCTGGTGGAATTCCTTCCTTATCCTGTATTTTGCCT 30
Query 140658 TTTACATTATCAATCGAATCAGATGGTTC 140686
|||||||| || || | ||||||||||||
Sbjct 29 TTTACATTCTCTATTGTATCAGATGGTTC 1
>seq80
Length=140786
Score = 93.3 bits (102), Expect = 1e-13
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607
|||| |||||||| ||||| || || || || ||||||||||| |||||||||||||| |
Sbjct 78371 CTTTCTGAATATTGTAATCGGACAAAGTACGTCCATCTTCAAGCTGTTTTCCAGCAAAAA 78312
Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636
| || || || |||||||| ||||| |||
Sbjct 78311 TCAGTCGCTGTTGATCAGGTGGAATCCCT 78283
Score = 89.7 bits (98), Expect = 2e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693
||||| || |||||||||||||| || ||||| | ||| | |||||| || || |||||
Sbjct 78236 CCTTCCTTGTCCTGAATTTTAGCCTTCACATTCTGAATTGTATCAGAAGGCTCCACTTCC 78177
Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
| || | |||||||| ||||| ||||| ||||| || |||||
Sbjct 78176 AAAGTGATGGTCTTTCCTGTTAGGGTTTTCACAAATATTTGCAT 78133
>seq103
Length=131296
Score = 89.7 bits (98), Expect = 2e-12
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 266973 ATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATTCCT 267032
|| || || |||||| | ||||| ||||| || || || |||||||| | ||| || |
Sbjct 19819 ATTGGTGACAAATTTGCCAGTCGTCACGGTCAGAAGGGCACCATTGGGATGATATATCGT 19878
Query 267033 GAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCAT 267092
|||| | |||||||| | || || || | || || ||||| || ||||| ||
Sbjct 19879 CAAGAGGACATGCCATTCACGTGCGAAGGCATCACGCCGGACATTATAATCAATCCACAC 19938
Query 267093 GCTATTCCTAGTCGTATGACAATTGGTCAATT 267124
|| ||||||||||| ||||| |||||||| ||
Sbjct 19939 GCAATTCCTAGTCGAATGACCATTGGTCATTT 19970
>seq1136
Length=1332
Score = 84.2 bits (92), Expect = 7e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 140640 TTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699
||||||||||||||| | || ||||| ||||| | || || ||||| ||||| || |||
Sbjct 1332 TTATCCTGAATTTTACCCTTCACATTTTCAATTGTGTCTGAGGGTTCCACTTCCAGAGTA 1273
Query 140700 ACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
| || || || || || ||||| ||||| |||||||||
Sbjct 1272 ATGGTTTTCCCAGTCAGAGTTTTGACAAATATCTGCATT 1234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515152630779326
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |