Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichinella_20murrelli_20[genbank_20GCA_5F001447425.1_202015-11-24] 5,242 sequences; 49,016,728 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq365 82.4 5e-11 >seq365 Length=37953 Score = 82.4 bits (90), Expect = 5e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||||||| |||||||| |||||||| |||||||||||||| Sbjct 17275 CCACCCCGAAGACGAAGCACCAAATGCAGAGTGCTTTCCTTTTGGATGTTATAATCTGAC 17334 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTA 34579 | |||| ||||||| | ||| || || ||| |||| Sbjct 17335 AACGTTCTACCGTCTTCCAATTGCTTTCCTATAAACATTA 17374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314709492909386