Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichinella_20nativa_20[genbank_20GCA_5F001447565.1_202015-11-24]
4,443 sequences; 47,933,238 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq3469 82.4 6e-11
>seq3469
Length=14404
Score = 82.4 bits (90), Expect = 6e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
|| || ||| |||| || || ||||| || || | |||||||| || |||||
Sbjct 7515 TTACCAGCAAAAATCAGACGTTGTTGATCGGGTGGAATTCCCTCTTTATCCTGAATTTTA 7574
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | || ||||| ||| ||| ||||| || |||||||| ||||||
Sbjct 7575 CCCTTCACATTTTCAACTGTGTCTGAGGGTTCCACTTCCAGAGTAATGGTTTTCCCGGTC 7634
Query 16913 AGCGTTTTGACAAAAATCTGCATTT 16937
|| ||||||||||| ||||||||||
Sbjct 7635 AGAGTTTTGACAAATATCTGCATTT 7659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405066064864570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |